Gene Sbal_3903 details

Gene Information

• Locus tag: Sbal_3903
• ID: 4843126
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: +
• Start bp: 4579002
• End bp: 4580888
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640121166
• Product: periplasmic/7TM domain sensor diguanylate cyclase
• Protein accession: YP_001052242
• Protein GI: 126176093
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2199] FOG: GGDEF domain
• TIGRFAM ID: [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTAAAC GAAACTCGTC ACTCATACTC TTGCTGTGGC TATGGATGTG TTCAACACCT 
TCATTCGCAA CCCTATTAAG CATTGATGAA TCAACGACGA CACCGTTAAA CCTTACGCCT 
TGGTTGATGG TGAGCCACCC AACTTCGGCG AAGGAATTTA CCGAGATCCA AGCCTTGCCA 
AAAACGGATT GGCATAACTT CACCAATAAA GACATTCAAA AACTCAGCGG CCATGATTTT 
TGGCTGAGTT TCAGCTTAAC TAGCCCAGAC GAAACACTTT CACGTATTTT AGCGTTAGAT 
AACCCCTTGT TAGACAAAGT GACTATCTAC CATTTAGTCA ATAATAAGCT CGCTAATACT 
GTGCTTATGG GCGACACCTT TCCCTATAAC GAACGGCCAT TTTTGAGCAA TATCTTCCTG 
TATCCTTTTA AGCTCAACAT GGATGATACC CATACTTTTT ATTTGCATAT TCAGACCGAA 
GGCAGCGCTG CAATACCGTT AAATCTCTGG TCATCTAACG ACTTAGCCCA GATTGCCGAA 
TCCACTGCCG TCGAACATGG TTTCCAACTC GGCGTACTTG CCGCGATTGG TATCTTTAGC 
CTCTTTATTG CCATTGCATC GGGCTCATTC AGTTACAGCT ATTATTCTGG CTACGTCCTG 
AGCATGACCT TGCTCGTCGC TACCATCAAC GGTTTTGCCT TTCGATTCCT CTGGCCAAAT 
TGGCCGATAT TACAGCAAGT TATGGTGCCA TTTTTACTGC CAATCGTTAT GGCGTTTGCG 
CTGATGTTTA CCGAAAAAAT ATTACAGCTC AAATATTTAA ACCGCCGCAT GCTGCTGACT 
TGTCGCTATA GCGCTGTGTA TATCCTATGT ATTGGACTCG CCACGCCTTT TATCCAATAT 
GGAACGGCGC TCTATATCGA GATCATTTCC GTTGCAGTGC TCAGCCTGGT ACTTATGGTC 
TTTGCCATTA CTCAGGCTAT CAATGGCCAT AAACTGGCAC GTATGTACAC TATTGGCTGG 
GTGAGTATGC TGACAGGAGC TTGCATCAGT AGCTTGTTGT ATCTCAGCGT GATTGACCTC 
AATTTAAAAC CGCAAACGCC TGTCATGCTC GGCCTGACGT TTGAAATCAT CTTTATGTCT 
CTGGTGCTTG CCATCCGCTA TAACGATGAA CGCAAAGCTA AGCTACGTAT TCAGCAAGAG 
GCCTTGAGGC AAGCACAGAA AATTCGCAGT GCGCGGGAAG AAGCCCTAAA AGCAGAAGCC 
GAGAGCAATG AGAAACTCGA GCAAATGGTG CAAGAGCGCA CCTTAGAACT TGAAATCACC 
CTCAGAGAAT TGCATGAGGT GAACCAAAAG CTCACCGAAC AAAGCACTAT CGATAGCTTA 
ACTGGGGTCA AAAACCGCAG TGCTTTCGAT AAACGTTTGA TCGCTGAAAG CCGGATCAGC 
CGCAGGCAAG AAACACCCAT AGCCCTGTTG ATGCTCGATA TCGATCGCTT CAAGCTGATC 
AACGATAGAT TTGGCCATCT TGCAGGCGAT GAAGCCTTAC GAACCATAGC CCAAACATTA 
CAGCAACATT TAAAGCGGCC AACGGATCTC GTATCACGTT ATGGAGGCGA GGAGTTTGCT 
ATCATCCTGC CTAATACAGC AGAAGATGGT GCACTCCAAG TCGCTGAAAC GATAAGAGAC 
GCAGTTGCCT CTCTCCATTT CGAATGGGAA GGTGTGGCGA TACCTTTGAC TATCAGTATC 
GGAGTCAGTG CCGATATCGT CACTAACGAT CAGCACAGCA CCAAATTATT AGAACAAGCG 
GATAAAGCCC TCTACCAAGC GAAAAATGGT GGACGTAATC AAGTCAGCTT ATTTTCATCA 
GTTCAAGCAC GACCAGTACC TAATTAG 

 

Protein sequence

MLKRNSSLIL LLWLWMCSTP SFATLLSIDE STTTPLNLTP WLMVSHPTSA KEFTEIQALP 
KTDWHNFTNK DIQKLSGHDF WLSFSLTSPD ETLSRILALD NPLLDKVTIY HLVNNKLANT 
VLMGDTFPYN ERPFLSNIFL YPFKLNMDDT HTFYLHIQTE GSAAIPLNLW SSNDLAQIAE 
STAVEHGFQL GVLAAIGIFS LFIAIASGSF SYSYYSGYVL SMTLLVATIN GFAFRFLWPN 
WPILQQVMVP FLLPIVMAFA LMFTEKILQL KYLNRRMLLT CRYSAVYILC IGLATPFIQY 
GTALYIEIIS VAVLSLVLMV FAITQAINGH KLARMYTIGW VSMLTGACIS SLLYLSVIDL 
NLKPQTPVML GLTFEIIFMS LVLAIRYNDE RKAKLRIQQE ALRQAQKIRS AREEALKAEA 
ESNEKLEQMV QERTLELEIT LRELHEVNQK LTEQSTIDSL TGVKNRSAFD KRLIAESRIS 
RRQETPIALL MLDIDRFKLI NDRFGHLAGD EALRTIAQTL QQHLKRPTDL VSRYGGEEFA 
IILPNTAEDG ALQVAETIRD AVASLHFEWE GVAIPLTISI GVSADIVTND QHSTKLLEQA 
DKALYQAKNG GRNQVSLFSS VQARPVPN