Gene Sbal_3887 details

Gene Information

• Locus tag: Sbal_3887
• ID: 4843110
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: +
• Start bp: 4565478
• End bp: 4566092
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640121150
• Product: SNARE associated Golgi protein
• Protein accession: YP_001052226
• Protein GI: 126176077
• COG category: [S] Function unknown
• COG ID: [COG0586] Uncharacterized membrane-associated protein

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAGAAG CGCTACAACA TATCATCACC GAACTCACCC CTTGGCTGCA GCAATACGGC 
TATGTGCTGC TATTTATCGC GATTGCTGTC GAGGGTTTTG GCATTCCAGC GCCGGGGCAA 
TCCTTATTGA TTGTCGCCAG TTTATTAGCT GCCACAGGGC AAATGTCACT GCCATTGGTG 
TTGATCGTCG CAGCTTGCGC TGCACTCAGC GGTAACAGCT TGGGATATTT TATCGGTTGG 
CGCTTTGGTG ATGTATTGCT TAAGAAGGGC TGGATAAAAC CGCAATTGGA AGACAAAATC 
CATGGCGTTA TTGGTCAATA TGGCGTTGCC GCTTTAGTGC TGAGTCGTTT TGTTGAGGGA 
TTAAAACAAT TTATGTTTAT CGGCTGCGGC TTGGCTAAAA TGCCACTTAA GCAATTTGTA 
ATAGGTAATG CCCTAGCCAC CAGCATTTGG GTGGCACTCT TTGGTTTAGG CCCAGTGTTA 
ATCCGCGATG AAATAGCTCC CATGCTGGCG TTTTACCACC AGCACAAATA CCCCACATGG 
GCCATTGTCA GCCTAATACT CGCCGCGTTA ATCACTTTTA CTTGGCGCAG TTGGCAAACA 
AAAAATCCGC AGTAA 

 

Protein sequence

MPEALQHIIT ELTPWLQQYG YVLLFIAIAV EGFGIPAPGQ SLLIVASLLA ATGQMSLPLV 
LIVAACAALS GNSLGYFIGW RFGDVLLKKG WIKPQLEDKI HGVIGQYGVA ALVLSRFVEG 
LKQFMFIGCG LAKMPLKQFV IGNALATSIW VALFGLGPVL IRDEIAPMLA FYHQHKYPTW 
AIVSLILAAL ITFTWRSWQT KNPQ