| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3882 |
|---|
| Symbol | |
|---|
| ID | 4843499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 4559035 |
|---|
| End bp | 4559610 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640121145 |
|---|
| Product | ATP-dependent protease La |
|---|
| Protein accession | YP_001052221 |
|---|
| Protein GI | 126176072 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACAC GAGAAATGGC GTTACTCATG CGCGATGCCT TGTTGCTGCC ACAGGGACGG
GTAGAAGTTC GTGTGGTCGA CCCCGGTCAT CTGCGCATGG TGGCCGATGT CTTCAAGGGA
AAGTATGCGC TCGCCTTTGC CACCATTCGA CCCCGCGGTA GTCCGCCCTG TTATCCCACC
GCTACCCAGT GCGACATTAT CGATTTTAAT CAGCTAGAAG ACGATTCACT CAGCATAGTG
CTCGAAGGGC GCCAGCGCGT TAGCATCCTC TCGGCGGCGC AGGCCAAAGA TAAGCTGTGG
ATGGCGCGCA CTTTACCCTG CCGTAACTGG CAAGAAGAGC CGATTAAAGG TGAATTTGAG
CTAATAAGCG CTGCATTAGA GCAATTTTAT GAGGTGAATC CCGATCTGTT TGAGCTCTAT
TCTCAAGTGC ATTTAGAAGA TGCGGCTTGG GTAAGCCAGC GCTGGCTCGA GGTTTTACCT
ATGTATAATA AAGACAAATT AGTGTTAGTC AATCAGCCCG ATTGCCACAA AACCTTGGAC
TTCGTGCTGC AACTTATCAA GTCCCATGTG GACTGA
|
|---|
| Protein sequence | MQTREMALLM RDALLLPQGR VEVRVVDPGH LRMVADVFKG KYALAFATIR PRGSPPCYPT
ATQCDIIDFN QLEDDSLSIV LEGRQRVSIL SAAQAKDKLW MARTLPCRNW QEEPIKGEFE
LISAALEQFY EVNPDLFELY SQVHLEDAAW VSQRWLEVLP MYNKDKLVLV NQPDCHKTLD
FVLQLIKSHV D
|
|---|
| |