| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3873 |
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| Symbol | |
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| ID | 4843491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 4548738 |
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| End bp | 4549445 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640121137 |
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| Product | C factor cell-cell signaling protein |
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| Protein accession | YP_001052213 |
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| Protein GI | 126176064 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAC TTATCGTCGG TGGAAGTGGG GGTATTGGTC AAGCTATGGT TAAGCAAGTC
CAAGAGACAT ATCCCGACGC CACAGTGCAC GCCACCTACA GGCATCATCT TCCTAACGAC
AGGCAGAATA ATATCCAATG GCATGCGCTA GATGTGACCA ATGAGGCCGA GATTAAACAG
CTGAGTGAAC AACTCACTGA ATTAGATTGG CTGATTAACT GTGTCGGGAT TTTGCACACC
CAAGATAAAG GGCCAGAAAA AAGCCTACAG TCACTGGATA TCGACTTTTT CCAGCACAAT
TTAACGCTCA ATACCCTGCC CAGCGTCATG CTGGCGAAGC ACTTCTGCCA TGCCTTAAAA
CAAAGTGATT CGGCAAGATT TGCCGTGATA TCGGCAAAAG TCGGCAGCAT TACCGATAAC
AGATTAGGTG GCTGGTACAG CTATCGGGCC TCAAAGGCCG CGCTGAATAT GTTTCTCAAA
ACACTGGCGA TTGAGTGGCA ACGGAACATG AAACACTGCG TGGTGTTATC CCTGCATCCG
GGCACCACAG ATACGCCATT GTCTCAACCC TTTCAACAGA GTGTGCCTAA AGGCAAACTG
TTTACACCTG AGTATGTCGC CAACTGCTTG CTGCCCATCA TTGCCAATGC CACTCCGGCA
CAAACAGGGT GCTTTTTCGC CTACGATGGC ACTGAGTTAC CTTGGTGA
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| Protein sequence | MKVLIVGGSG GIGQAMVKQV QETYPDATVH ATYRHHLPND RQNNIQWHAL DVTNEAEIKQ
LSEQLTELDW LINCVGILHT QDKGPEKSLQ SLDIDFFQHN LTLNTLPSVM LAKHFCHALK
QSDSARFAVI SAKVGSITDN RLGGWYSYRA SKAALNMFLK TLAIEWQRNM KHCVVLSLHP
GTTDTPLSQP FQQSVPKGKL FTPEYVANCL LPIIANATPA QTGCFFAYDG TELPW
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