Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3856 |
Symbol | |
ID | 4845792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 4530091 |
End bp | 4530927 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640121120 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_001052196 |
Protein GI | 126176047 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.20088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAACAC CTGGACTCGA TCAGGAATTG CAGCAACTAC AAGGCGTTTA TCAGCTGATC ACAGAGTTTC TAGTCACCTA CAGCTTCCAA TTGGTCGGCG CTTTGCTGAT CTTTTTACTG GGTTTGTGGG TCGCTAGTAA GGCATCACGT TTAGTCGCAA AACAGTTCGA AAAACACAAT ATCGACATTA CCTTAAGCAA TTTTGTCAGT AACCTTATCC GCATTCTGAT CATCATCATG GTCGGGATCA TCGCCCTCGG CAAAATTGGC ATCAGCGTCA CCCCTATGGT AGCAGCCATT GGTGCAGCCT CCTTAGGTGC TGGCTTAGCC TTACAAGGCA TGTTAGCCAA CTATGCCGCC GGCGTGACCA TTATCGTCAC CCGTCCTTTC GTTGTGGGAA ACACTATCGA AATCAAAGGG GAAAGCGGCG TCGTTAAACG TATTCACTTA GGCATGACCA TTCTGAGTAA TGAGGAAGGC GAACAAATCA GCATTCCCAA TAAGCATATC GTCGGTGAGA TCCTGCATAA TTCCTTTAGC AATAAACTGG TCGAAACCCA GTTTAATCTC AGTTACAACA CAGATCCCGA ACGGGCCATT AGTGTGATCA CTGAGTTATT GAGCAACAAT CCCTATGTCT ATCAAGAGAC CATGCCCAAT ATCGGCATCA ATGGTTTTAA TGCTATCGGG ATTGAAATGG GAGTGCGCTA TTGGGTGCCC ACGCAAAGCT ATTTTCAGCA TAAATATAAG GTGAACTTAG CACTCTACAA CGCCCTTAAG CAGGCGGGAA TCGAGATTGC CTGCCCCATC AGAGAGATCC ATCTGCAAGA TAAATAA
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Protein sequence | MITPGLDQEL QQLQGVYQLI TEFLVTYSFQ LVGALLIFLL GLWVASKASR LVAKQFEKHN IDITLSNFVS NLIRILIIIM VGIIALGKIG ISVTPMVAAI GAASLGAGLA LQGMLANYAA GVTIIVTRPF VVGNTIEIKG ESGVVKRIHL GMTILSNEEG EQISIPNKHI VGEILHNSFS NKLVETQFNL SYNTDPERAI SVITELLSNN PYVYQETMPN IGINGFNAIG IEMGVRYWVP TQSYFQHKYK VNLALYNALK QAGIEIACPI REIHLQDK
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