| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3848 |
|---|
| Symbol | |
|---|
| ID | 4843977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 4522753 |
|---|
| End bp | 4523691 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640121112 |
|---|
| Product | band 7 protein |
|---|
| Protein accession | YP_001052188 |
|---|
| Protein GI | 126176039 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.194904 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTC CATTAGATAC AGATTTGATT GTGATGGCAA TTTGGGGACT GATTTTTGCC
ATTTTCGTGA TTAAGCTTTT CCAATCGATC CGCCTAGTAC CCACTAAGTC GGCTTATATT
GTTGAGCGTT TAGGTAAGTA CCACAGCACC TTAGATGCAG GTTTCCATAC CTTGATCCCC
TTTGTGGATA AAGTCGCTTT CATTCATGAT TTGAAAGAAG AGACCATCGA TGTACCGCCA
CAGGAGTGTT TTTCGAGCGA CGAAGTTAAC GTTGAAGTGG ACGGGGTGAT TTATATCTCT
GTGACCGACC CAGTCAAAGC CAGTTACGGT ATTACCGATT ATCGCTATGC AGCTATCCAG
CTGGCACAAA CCACGACGCG ATCTGTTATC GGTACGCTGG ACCTTGACCG CACTTTCGAA
GAGCGTGATG TGATTTCTGC CAAGGTCGTG CAGGTATTAG ATCAAGCGGG TGCCCTGTGG
GGAATACGTG TGCATCGTTA TGAGATTAAA AATATCACCC CACCTGAAAC CGTTAAAAAT
GCCATGGAAA TGCAAGTGAA TGCTGAGCGT GAGCGCCGGG CATTATTGGC TAAGAGTGAA
GGCGACAAAC AGAGCAAGAT TAACCGTTCA GAGGGTGTTA AAGCTGAGAC GGTAAACCGC
TCTGAAGGTG AGATGCAGCG CCGGATTAAC GAAGCTGAAG GTAAGGCTGA GGAAATTTTA
ACTATTTCCC GTGCGACGGC GGAATCGATC GAACGTCTTG CCACAGTTAT TGCTGCGCCG
GGTGGCCACA ATGCCTTGCG GATGCAACTT GGTGAACAGT ACTTTAAACA GCTCGATGGC
TTAAGCCAGA AGAATAGCCG AGTGGTATTG CCGGGTAATA TGGTGGATTT CGATTACTGG
ATGAATAGCA TAGGCTTAAC GGAAGAAAAA CCGAGCTAA
|
|---|
| Protein sequence | MNIPLDTDLI VMAIWGLIFA IFVIKLFQSI RLVPTKSAYI VERLGKYHST LDAGFHTLIP
FVDKVAFIHD LKEETIDVPP QECFSSDEVN VEVDGVIYIS VTDPVKASYG ITDYRYAAIQ
LAQTTTRSVI GTLDLDRTFE ERDVISAKVV QVLDQAGALW GIRVHRYEIK NITPPETVKN
AMEMQVNAER ERRALLAKSE GDKQSKINRS EGVKAETVNR SEGEMQRRIN EAEGKAEEIL
TISRATAESI ERLATVIAAP GGHNALRMQL GEQYFKQLDG LSQKNSRVVL PGNMVDFDYW
MNSIGLTEEK PS
|
|---|
| |