| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3833 |
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| Symbol | |
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| ID | 4845875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 4505057 |
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| End bp | 4506397 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640121097 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001052173 |
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| Protein GI | 126176024 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.117065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTGA TCAACAAGAT GCTGCAGGAT CTCGACAAAC GTCAGCAGGG GCACGAACTT
AGTAACGTCA CTCAACCGCA GGTGCAATAT TTAGCTCGCA GGCGTTCATC ATCTCACTGG
CTGCCGCTCT GTGGTTTGTC ACTGCTACTC GGTGGCGGCG CGGTTTATGG CTGGCAATTT
TTCATGGCAG AGCCTGCAGA AGCGACAGCT TCAGCTCAAG CGCAGGAACA ACATACATTA
ACCGCCCAAA ATGAGCCTGT GCGGATGGAG AGTCTTGTCT CAAAAGAGTC TTCACCTAGC
GTCGATGCCG CTGCTGAACC ATTGAAGCTT GCGACTGCGC AGAAGATTGC GGCAGCGATG
ACAGCGAATA GTGAAGAGTT TGAACCAAGT GCCAGCGACG TGGCATCGAG TCAGGCACCA
GAATTGGGAA CCGCAAAAGA GGCTGAACCT GAGCGACAAG CGCAGCCACA ACAAAAACCA
CAAGCAGATG TGAGCCTTGC ACTCGCAGCG GACAAGGTCG ATACGGTAAG CGAGCCAAGC
CATTCACAGC CAAATCGTGC GACATCGAGT GTGCGTAGCG CCGAGGTCAC TGTAGCCGCG
CCCTCTGCAT TAATGATGTC GGAGCGGGCC AGTGTTGCCG CCGATAATGA AGGTAACGCG
AGCAATGGGC TTAACGTACA AGAAGTTAAA GCAGATGCAG GCACTCATCA ACTCGCGCCC
AAAGAACAAG GGCAAATGGC GATTACTGAG GTTAAGTTAA CGCCAAAGCA GCTGGCAAAG
AAGCGGTTCA CGTTAGCGAG CGAGGCCGAA AGGGATGGCA AGCTCAAAGA GGCCATTAGT
TATTATGAGC AAACCTTGGC GCTTGAACCC AGCATGCACG AAGCGCGCAA GCAATTGGCT
GCACTGCATT ATGGCCAAGG TCAATTAGCC AAAGCCAGTG AAGTGTTACA GCAAGGTATG
CTGTTATTCC CGCAGCAATT AGACTTCGCC TTATTGCTCG CTCGGGTTCA GCAAGCCGCT
GGTCAGGCTG ATCTCGCATT AGCGACGTTA GCCAACATAC CTGATACGCA TCCGCTGGCG
AGACAAAAGT GGATGGCACA ATCGGATTTG GCACAAAAGC TAGGGCAGTT TTCAGTGTCG
GAACAAGCCT ACAGGCAGTT ATTACAACAA GAACCTCAAC AGGCTAAATG GTGGATGGGA
CTGGCTTATG CGCTTGATTC GCAGCAGCAA TTTCTCCAAG CACGCCAAGC CTATCGGACT
GCGTTAGGCC ACAGAGGCTT ATCGGCGCAG GCGAGTGCCT TTATCGAACA ACGTTTGACT
CAGCTAGGAG ATAGCCAATG A
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| Protein sequence | MSVINKMLQD LDKRQQGHEL SNVTQPQVQY LARRRSSSHW LPLCGLSLLL GGGAVYGWQF
FMAEPAEATA SAQAQEQHTL TAQNEPVRME SLVSKESSPS VDAAAEPLKL ATAQKIAAAM
TANSEEFEPS ASDVASSQAP ELGTAKEAEP ERQAQPQQKP QADVSLALAA DKVDTVSEPS
HSQPNRATSS VRSAEVTVAA PSALMMSERA SVAADNEGNA SNGLNVQEVK ADAGTHQLAP
KEQGQMAITE VKLTPKQLAK KRFTLASEAE RDGKLKEAIS YYEQTLALEP SMHEARKQLA
ALHYGQGQLA KASEVLQQGM LLFPQQLDFA LLLARVQQAA GQADLALATL ANIPDTHPLA
RQKWMAQSDL AQKLGQFSVS EQAYRQLLQQ EPQQAKWWMG LAYALDSQQQ FLQARQAYRT
ALGHRGLSAQ ASAFIEQRLT QLGDSQ
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