| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3829 |
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| Symbol | |
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| ID | 4845871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 4500838 |
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| End bp | 4501455 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640121093 |
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| Product | MSHA pilin protein MshB |
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| Protein accession | YP_001052169 |
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| Protein GI | 126176020 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000175672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAACTA AGCAAACAGG TTTCTCATTA ATAGAGCTTG TGATTGTGAT TGTGATTTTA
GGGCTACTCG CTGCAACCGC GATCCCACGA TTTTTAAATG TCACCGATGA TGCTGAAGAC
GCCAGTGTTG ACGGTGTCGC CGGTGGTTTA TCGACTGCCG TTAGCTTTGT ACGTTCGCAG
TGGGAAGTTG ATGGGCGCCA AAATAGCAGC GTGATCTTGG ATGGTACGTC AGTTTCGCTC
GATCCTCGTT TTGGTTATCC TACAGGGACT TCCGTGACGG ATGTGACTGC GATGACGGAT
GCGAGTTGCC AACAAGTATT TAATACCGTG CTGCAGAGTG CTCCTCGTAA TGTGCTCTAC
ACTCAAGATG CGCGTAATCA ACGTTATACC GTGCGCGTGA TTGATGGTGC AGGGGGTAGC
GCTAATTCGA TTACAGGCAC TGTCGTTACT GGTTTAGATT TATGTGTTTA TCACCAAGTG
GCTTCACTGG TGATAAATCA AACAACTGGC GTACCCACTC CTACACCGGA TTTATCAACA
GCTGGTGCGA AAGGAGTCGT GTATAACCCA GGTACAGGTA AAGTGCTAAG CTTTACCCAA
ACACCATTTG TGCCATAG
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| Protein sequence | MKTKQTGFSL IELVIVIVIL GLLAATAIPR FLNVTDDAED ASVDGVAGGL STAVSFVRSQ
WEVDGRQNSS VILDGTSVSL DPRFGYPTGT SVTDVTAMTD ASCQQVFNTV LQSAPRNVLY
TQDARNQRYT VRVIDGAGGS ANSITGTVVT GLDLCVYHQV ASLVINQTTG VPTPTPDLST
AGAKGVVYNP GTGKVLSFTQ TPFVP
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