| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3817 |
|---|
| Symbol | |
|---|
| ID | 4845859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 4483481 |
|---|
| End bp | 4487860 |
|---|
| Gene Length | 4380 bp |
|---|
| Protein Length | 1459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640121081 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001052157 |
|---|
| Protein GI | 126176008 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3164] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGCAC CTTTTACTGC AAAAAAACTA AGTCGTTTTT GTTGGCAATT TATCGCGCTA
ATCTTAGTGC TATTTGCGCT TGCAGTGAGT TTGATCCGTG GCTTATTGCC ACAGGTTGAT
GGGGTGCGTC AGCAACTGGT TGATTACGTA AAAAGCGAAT ATAAGGTTGA TGTGCAAGTG
GGGGAATTAT CCGCCCACTG GCAAGCGTTT GGTCCGGCAA TTAACATAGA CAATCTAGTT
ATCCCGCCGC AGGAACAACT GCCCGTCACC CTGATTATCA AGAATGTGCA AGTGAAGTTA
GATTTTTGGC AATCGCTGCT GACCTTCACG CCGCGTATTG AAGATGTCAA TTTTGATGGT
GTCCATATCG CGTTAAATAT GGACAAGCTG ACCGAAAATA ATCCCGCCGC AACCAATAAA
ACGCCGCAAG TTGATTGGCT CTATGCATTA TTGCTCAAGC AACTCGACAG ATTTTCGTTA
ACCCATGCCA CAGTGCAGCT GCTCAGCTTG CGCCAAGAGT TTCGCCCGAT CCATATTCGC
CAGCTAAATT GGCGCAATAA CGGCGAGCGT CACCGCGGTG CAGGGGAACT GTATCTTGAT
GATAATGCCT CTGAGCATGA GTCTCTGGGA TTACAGTTAG ATCTCAATGG CGATGGCGCG
AATCCTGATA GCTTAACGGG GCAGATTTAT CTGGCGGCTA ACTCATTAGA CTTAGGTGAG
TGGGCATCGC GTCAGCCTAA TCCCTATGAT GCGAGCAAAA AATTACCCTT AGAAGGGGTT
GTTAATCTTA AGGCTTGGTT TACGTTTGCC GATCGCAGCA TCAGTTCTGC CATGGTTCAT
TTTGAGCCGA GCTGGTTGCA ATGGACCTTA AAGGAAGTGC CACAACGATT TGAAATCCAA
GCGGGTGATA TCGTTTGGCA GCCAAAGGAC TCTGGCTGGG AAGTACAGAG CTCAGGGCTC
GACTTTGTCA CTAACGGTGA GCATTGGCCG CAGTTAACGC TGGCGGCTAA GCGTCAACAT
GACGAATTCT TTGCCTATGT GAATCAAGTT AACACTCAAA ACCTGTTACC CCTGTTACCG
CTATTCCCCG GAGTCGATAA AGCCGTATTG CATCAATGGC ATGCTTTCGC GCCTGAAGCC
AGTATTGGGC CCATTCGACT GTATCAAAAG GCCGATCAGC CTTTGCTCGC TACTTCTGAG
GTGAAACAGT TACATTGGCA GAAGGTCGAC GGTATCCCCA ATACTCATCC TTTGGATCTG
AACTTACATT GGCAAGACCA GACGCTGTAT TTCTCTTTGC CTGCACAAGT TTATACCGTG
GATTTTGGAG ATGAATTTTC GGCGCCACTC GTCTTTAACG GTGCGGCAAT TGATGGTCAG
TTCAATACTG CAGAGTTGAG TTTAAATCTG CCGCAGTTGC AGCTTGAGAA CGATGACATA
GGCTTAGATG CCGCGCTTAA ATTGGATTTC AGTGCTGCGG CGCATATGGC GCTGGCCGCT
AATGTTCATA TCAATAATGT CGCCAATGCC GACAAGTATT TCCCCAATAA GGCGATGGGC
GAATCGCTGG CTGAATATTT AGATACTGGA CTTAAAGCGG GTCAGACTCA AGATGCACAG
GTCGTTTGGC GTGGTCCGTT AAACGGTTTC CCCTTCGATG ACAATAGCGG CGTGTTTCAA
GCGGCATTTA CTTTAACGGA TGCCCAATTC CAGTTTCAAC CCGATTGGCC TGCGGTCACA
GACTTATCCC TTAATGCTTT GTTTGAAAAT GCTCGTATGG ATCTTTGGCT CAACCAAGGC
AAGCTAATGA ACGTGGATGC CACGGGGGCC CATGTATTTA TTCCCGCGAT TGGCGAGCAC
ACGCTGCTGA GGATTGAAGC TGAACTTGCC ACCCAAGGCA GCGCGGCAAC TAAGGTGTTA
CAAGCCTCGC CTTTGGCGGG TTCAGTGGGT AAAACCTTAG ATGTCGTGCA AGTGCAAGGC
GCTGTGACTG GCAATTTGGA TATCAGTATT CCGCTGTATG AAGGAGGCGC AGAAGATATT
CGTGGTCAAA TTAGTTTTGA TAACACGCCC GTGTATATTG CCCAGCCCGG ACTGCAGCTT
AATGGCGTAA CGGGTATCGT CGACTTTGCG AATGAGGTGG TGACAGGTAA AGGTATTAAA
GCGCGTTTGT TCGAACAGCC GCTCAACTTA ACCTTTGATA CTCAGCCTAA AGGCAAAGAT
TTCGGTCTTA ATCTTTTACT CAAAAGTCGT TGGGATCTGA ATCGTCTCCC CGAAGAATTA
CATAATCCTT TGAGTGATTT CTATCAGGGT AAAATCAGTT GGGACGGCGC GATGACTATG
CTGTTTACTG AAAAAGGTTA TCAAATTCAA GCCAAAGTAA CTTCGGATAT GGTTGGCACT
CAACTGTCAT TCCCAGGATA TTTTGCCAAA CCCGAAGATG AGCCGCGGCC CTTAGTCGCT
GAGTTTATTG GCGATCAAAA TGATGCGACC TTAGATGTAA AGCTGGCGAG TCATGCCGAG
TTTATCGGTG GTTTCGATGC TGAAAAAGGC GCTAATTTTA GTTATTTTGA TTTGTTATTG
GGGCGTTTAT TCGATGAGGA TGAAGCCCGA AATACTGAGA AAGGTCATAT TCAAATTGAC
CTTGGCAAAG CGAAATTAGC TGACTGGTTA CCTGTGATTA ATACCTTTGT TGGCCAAGAC
AAATTGCCTA AAACCGGCAT CCTCGTCGAG GATATCGACC ATGACAGTTT ATTCCCAGCT
GTGGCGAGTA TCGATTCCCA TATTGGCCGC CTCGACCTTT TAGGGCAACA GCTGACCGAG
CTTAGGCTCA ATGCGAAACC CAATGAAACG GGCTGGCGTT TTAATACCGT TGCCAACGAA
TTTGACGGCT GGGTCGATTT CTATCCCAAC TGGCGAACCC AAGGCCTCAA AGTTGTGGCG
AGTAAATTCT ATTTTTCACC AGAGGTTAAG CCGGATACCG ATGCCGATTT TGCCAGCGAT
CAAGTGCTGA CGAACCTGCC ACCCGTGGCC GTGAATGTGG AAGATTTTCG TTTCTTCGAT
AAACCTTTTG GCAAGCTAGT CTTGCAGGCG AGCCCCCAAG CGGCAGGCTA TAAAATCCAA
ACTCTGTCGT TGACTACGCC CAATGTGACC TTGCAGGGCA GTGGTATTTG GCAGCAACAG
GCAGGGCAGA ATAAAACTGA TCTGAGTGTC GAATTGAACG CCACTCAGTT TAATTATCTC
TCGGCTCAGT TGGGCATAGA TCCCGGCGTG AATGAAGCGC CATTAAAGGT TAACGCGGAT
TTATCTTGGC AAGGTGCGCC TTATGCTTTC TCCCTTGAAA CCTTAAATGG CAAGGTGAAA
TTCGACTTAG GCAAAGGGCA TTTATCTCAG GTGAGTGATA AGGGCGCACG CATTTTCTCC
TTGTTCAGCT TAGATTCTCT GGTGCGTAAA CTGTCGCTGG ATTTCACCGA TGTCTTCGGT
CAGGGCATGT ATTTCAACTC CTTCAATGGC AATCTGCAAA TTGATAATGG CGTGGTGAAA
ACTACAGATA CCGAAATGGA TGCGATTGCG GGCAATATGA AGGTCCGTGG CTATACGGAT
CTCACCACTG AAAGTTTGAA TTACGATATC CGTTTTGTGC CGCAATTGGC CTCGAGTGTA
CCGACGGTGG TATTGCTCAG CACCAGTGCC TGGACACTCG GTCTGGGCGC ATTTGCCCTG
ACAAAAGTGC TTGAGCCTGT GATTGAAGTA ATTTCAGAAA TTCGTTTTCG GGTGACCGGC
ACTATGGCTG AACCTGTGGT TGAAGAGCTG GAACGTAAGA GTAAAGAGAT TGAAATTCCT
GAGGCTATTT TACCTGTTGT TGGAGTTGAG CGCCCAGCGG CGCCGACCGA AGCCGCGAGT
CATAACGCCG ATATCACTCA GCCGGTAGAA GCGAAATCGA CCGAAGCTCA ATCAACAGAA
GCTAAGCCAA TTGAAATTAA GTCAACTGAA ATTAAGCCAA CTGAAGTCAA ACCGAGCAAC
GCTAAATCTG AGCCAACTCA AGCGCCACTT TCTCAAATAT CAGAGCCACA GCTTCAAGCA
ACACAACCAG AAGCGCTTGA GCCACAAGCA GTTAAGCCTG AAGAGGCCAG AACTGAAGAG
TCAAAGTCAG AAGAGCTAAA GCCAGCCACA GATCAAATTA AAGCGCCCGA TTTAAAGTTG
GTGCAACCTC AAGCAACGCC TTCGCTTGAA GTACCGAACA CGCCCGCCAC ACCAGAGAAT
CAGCCAGCAG TAGAACCGAT TAAGCAAATT CAGGGAGATC AGAATGCACA TCAGCCTGTT
GCAATGTCAG AGCAGTCGCG ACGTCAGCGC CAATCTGCTG TTTATCGAAT CGCAGCTTAA
|
|---|
| Protein sequence | MAAPFTAKKL SRFCWQFIAL ILVLFALAVS LIRGLLPQVD GVRQQLVDYV KSEYKVDVQV
GELSAHWQAF GPAINIDNLV IPPQEQLPVT LIIKNVQVKL DFWQSLLTFT PRIEDVNFDG
VHIALNMDKL TENNPAATNK TPQVDWLYAL LLKQLDRFSL THATVQLLSL RQEFRPIHIR
QLNWRNNGER HRGAGELYLD DNASEHESLG LQLDLNGDGA NPDSLTGQIY LAANSLDLGE
WASRQPNPYD ASKKLPLEGV VNLKAWFTFA DRSISSAMVH FEPSWLQWTL KEVPQRFEIQ
AGDIVWQPKD SGWEVQSSGL DFVTNGEHWP QLTLAAKRQH DEFFAYVNQV NTQNLLPLLP
LFPGVDKAVL HQWHAFAPEA SIGPIRLYQK ADQPLLATSE VKQLHWQKVD GIPNTHPLDL
NLHWQDQTLY FSLPAQVYTV DFGDEFSAPL VFNGAAIDGQ FNTAELSLNL PQLQLENDDI
GLDAALKLDF SAAAHMALAA NVHINNVANA DKYFPNKAMG ESLAEYLDTG LKAGQTQDAQ
VVWRGPLNGF PFDDNSGVFQ AAFTLTDAQF QFQPDWPAVT DLSLNALFEN ARMDLWLNQG
KLMNVDATGA HVFIPAIGEH TLLRIEAELA TQGSAATKVL QASPLAGSVG KTLDVVQVQG
AVTGNLDISI PLYEGGAEDI RGQISFDNTP VYIAQPGLQL NGVTGIVDFA NEVVTGKGIK
ARLFEQPLNL TFDTQPKGKD FGLNLLLKSR WDLNRLPEEL HNPLSDFYQG KISWDGAMTM
LFTEKGYQIQ AKVTSDMVGT QLSFPGYFAK PEDEPRPLVA EFIGDQNDAT LDVKLASHAE
FIGGFDAEKG ANFSYFDLLL GRLFDEDEAR NTEKGHIQID LGKAKLADWL PVINTFVGQD
KLPKTGILVE DIDHDSLFPA VASIDSHIGR LDLLGQQLTE LRLNAKPNET GWRFNTVANE
FDGWVDFYPN WRTQGLKVVA SKFYFSPEVK PDTDADFASD QVLTNLPPVA VNVEDFRFFD
KPFGKLVLQA SPQAAGYKIQ TLSLTTPNVT LQGSGIWQQQ AGQNKTDLSV ELNATQFNYL
SAQLGIDPGV NEAPLKVNAD LSWQGAPYAF SLETLNGKVK FDLGKGHLSQ VSDKGARIFS
LFSLDSLVRK LSLDFTDVFG QGMYFNSFNG NLQIDNGVVK TTDTEMDAIA GNMKVRGYTD
LTTESLNYDI RFVPQLASSV PTVVLLSTSA WTLGLGAFAL TKVLEPVIEV ISEIRFRVTG
TMAEPVVEEL ERKSKEIEIP EAILPVVGVE RPAAPTEAAS HNADITQPVE AKSTEAQSTE
AKPIEIKSTE IKPTEVKPSN AKSEPTQAPL SQISEPQLQA TQPEALEPQA VKPEEARTEE
SKSEELKPAT DQIKAPDLKL VQPQATPSLE VPNTPATPEN QPAVEPIKQI QGDQNAHQPV
AMSEQSRRQR QSAVYRIAA
|
|---|
| |