Gene Sbal_3812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_3812 
Symbol 
ID4841596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp4477198 
End bp4478490 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content49% 
IMG OID640121076 
ProductABC-2 type transporter 
Protein accessionYP_001052152 
Protein GI126176003 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.188014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTGAAC GCACGCCCAA CGCTAACACA GTCGACAAGA CTAAAGCTGA ATCACAGCCA 
TCGAGTAGAA GCTTTATGGC CTTGCTCATC GCGTTAATTC GCCGTGAGCT TAGTGCCCTG
TGGCGCGATC CTTGGCAGTT GGCGCTGATC AGTTATATTC CGCTGATCGG GATTTTCTGC
CTGTGGTGGC TATTCAGTGC AGGCTTACCG AGGCAACTGC CGGTGGCGAT TGTCGATCAA
GACCACAGTC AATTAAGCCG TATGCTGACC CGTCAGCTGA AGGCAAATCC TGTGACAGAG
CCACAGAATT TCACCGATTT AGCCGCGGCG GTGTCGGCGA TGCAGCAGGC GAAAGTCTAC
GCTATCGTGG TCTTTCCCTA TGATATGAAA AAAGATTTGC TCACTGGCCA CAAGCCCACC
ATAGATGTGC GCTACAACAG CCAATTTTTG CTGGTGGGCA AGTTACTCTC AAGCCAAATT
CAGTTGAGTC TGGGTGATGG TTTGTTGCAA GTCGCGGGCT TAAAACAGCT CGCCAACGGT
ACACCTAAAT CCCAAGTGGC AGTCAATTTA AGCCCAATCA AAAGCCAAAC AACGGCTTTG
TTTAACCGAA ATAACAACTA TATAGGCTTT TTAGTGCCGC CAGTGCTCGT TGCGCTGTGG
CAATTATTAT CTATGTTGGT CATGGCTAAC AGCTTAAATC GAGAGCTGCA TTTAGCGCCC
ACGACTCAGG TCAATGGCAT ATCGAATACC TTAACCGAGC ATTTTTGGCC TAAAGTGCTG
GCGAAATTGG TGTTGTTTAC GCCGATATTG ATGCTGCAGG GCGGCTTTAT TTTAACTTGG
CTGTACTTGT ATCTCGCGTT GCCGATGGCG GGTAGTTTAG CCCTATTGCT GTTAGCGCAA
TTAGTGATGT TGCTGGCGGT CTGGAGTGTG GTGTTATTAA TCTTTGTGGT AATGCGTGAC
AGTGCGCGGG TCATCAGTTT TTGCACAGCC TTATTTGCGC CCGCCTTTGC CTTTATGGGG
ATCACTTTTC CCACCCATGA TATGCCGCAA TTGGCGCAGT GGTGGCGACA GATAATGCCG
TCGAGCCACT ATATTGAGTC CCATGTGAGT GTCGTCAGTT ACGGCGCTGC TTGGCCGAAT
GTGGCGATCC AACTCAGCAG TTATTGGGGC TTTATCTGTT TGCTGCCTTT GATATATTTG
TTATCGCGTA AATTACTGCC CATCACAGTC AACGCTAACA CTATCGTGAC AGCATATGAC
TCGGACGCAG CCTTACCTGC GAAGGGGCAA TAG
 
Protein sequence
MTERTPNANT VDKTKAESQP SSRSFMALLI ALIRRELSAL WRDPWQLALI SYIPLIGIFC 
LWWLFSAGLP RQLPVAIVDQ DHSQLSRMLT RQLKANPVTE PQNFTDLAAA VSAMQQAKVY
AIVVFPYDMK KDLLTGHKPT IDVRYNSQFL LVGKLLSSQI QLSLGDGLLQ VAGLKQLANG
TPKSQVAVNL SPIKSQTTAL FNRNNNYIGF LVPPVLVALW QLLSMLVMAN SLNRELHLAP
TTQVNGISNT LTEHFWPKVL AKLVLFTPIL MLQGGFILTW LYLYLALPMA GSLALLLLAQ
LVMLLAVWSV VLLIFVVMRD SARVISFCTA LFAPAFAFMG ITFPTHDMPQ LAQWWRQIMP
SSHYIESHVS VVSYGAAWPN VAIQLSSYWG FICLLPLIYL LSRKLLPITV NANTIVTAYD
SDAALPAKGQ