| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3808 |
|---|
| Symbol | |
|---|
| ID | 4841592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 4472091 |
|---|
| End bp | 4473413 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640121072 |
|---|
| Product | transposase, IS4 family protein |
|---|
| Protein accession | YP_001052148 |
|---|
| Protein GI | 126175999 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3385] FOG: Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTCT CAGAAGCACT CGCCCGCACT CATATTACCC GCCTAACCGA ATTCACCTGC
TTAGCTGATG TGTTAGAACC TGAGTTAATT CAATCTTGTT TAGACTCACA AGGCGTTGCG
ACGTTAAGAC GGCGTAAATT GCCGATGGAC GCGATGATTT GGGCCGTTAT CGGAATGGCT
TTGTTCCGAG GGGAGTCTGT TCGGTCGCTC ATCAACAAAC TCGACATTGT TTTGCCGCAA
GAGATTGATT ATGTTGCACG CAGCGCCGTG ACTCAGGCGC GTAAACGATT GGGCAGTGAG
GTTATTCGAG AAGTGTTTAG TCGCAGCGCC AATACCTGGC ACGCGAGAGC TGAACATCCT
CATTGGTGCG GTCTTAACTT GTATGGTGTT GACGGTGTAG TGTGGCGGAC ACCCGATAGT
GTCCAAAATC AAGCCGCCTT TGCACGAACC GCAAACGCTT CAGGCGAAGC GGTTTATCCG
CAAATTCGGA TGGTTTGCTT GATGGAGTTA ACCAGCCATT TGTTGGTCAA TAGCGCCTTT
GATTCGGTTG CCGAAAATGA AATGAACTTA GCATCTCAGC TCATTCCTAG CATTCCCAAT
CACAGCCTAA CCCTATTTGA CCGAGGATTT TACTCGCTCG GCCTGTTACA CGCTTGGCAG
CAAGCGCAAC CTGACAGCCA CTGGTTGTTG CCATTGAAGA AAGGCACTCA ATATGAGGTG
GTTCGAACAT TGGGAAAACA TGACCAGTGG GTGAAACTCA CCACCACGCC TCAAGCCAGA
AAGAAATGGC CGCAGCTCCC TGATACCCTT GAAGCGCGTT TACTCGCTAA GACAGTGAAA
GGTAAGTCAG TCGCCATTTT GACCTCGTTA ACTGACCCGA TGCGTTACCC CAGCGAAGAC
ATCGTCGACT TATATGCCCA TCGATGGGAA ATCGAACGGG GCTACAGAGA GATGAAACAA
CATCTGTTGG AGAGTCGTTT TACGCTACGC AGTCAACTAC CGGAGCTGGT GACTCAAGAG
TTGTGGGGCG TGCTACTGGC CTATAATCTC ATTAGATATA AGATGTTGCT GATGGCTAAA
AGCTTGCCAT CGGTCCATCC TAATCAACTG AGTTTTAGGG ATGCGGCGAG TTATATCATC
TTCAAGTTGA CACAACTGCC ATCACAAACA CCGGGGAATG TTCCGAGAGA CGTATTGGAT
ATAGAACGAA ATGCACGGCA ATTTAAGTTG GATGGTAAAC GAGAAAGGGC TTATCCAAGA
GTCCTTAAAA TGAGCAAAAA CAAGTTTCCG GTTAGACCAA AGAAAAATGC CGTTCACTCT
TAA
|
|---|
| Protein sequence | MQLSEALART HITRLTEFTC LADVLEPELI QSCLDSQGVA TLRRRKLPMD AMIWAVIGMA
LFRGESVRSL INKLDIVLPQ EIDYVARSAV TQARKRLGSE VIREVFSRSA NTWHARAEHP
HWCGLNLYGV DGVVWRTPDS VQNQAAFART ANASGEAVYP QIRMVCLMEL TSHLLVNSAF
DSVAENEMNL ASQLIPSIPN HSLTLFDRGF YSLGLLHAWQ QAQPDSHWLL PLKKGTQYEV
VRTLGKHDQW VKLTTTPQAR KKWPQLPDTL EARLLAKTVK GKSVAILTSL TDPMRYPSED
IVDLYAHRWE IERGYREMKQ HLLESRFTLR SQLPELVTQE LWGVLLAYNL IRYKMLLMAK
SLPSVHPNQL SFRDAASYII FKLTQLPSQT PGNVPRDVLD IERNARQFKL DGKRERAYPR
VLKMSKNKFP VRPKKNAVHS
|
|---|
| |