Gene Sbal_3798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_3798 
Symbol 
ID4842341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp4457815 
End bp4458588 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content45% 
IMG OID640121062 
Productdiguanylate phosphodiesterase 
Protein accessionYP_001052138 
Protein GI126175989 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTCC CCGCTCGAAT AAAGCAGCAA ACATGCATGG ATTGCTTAAG TGGTAAGTCA 
TTAGGATTTG AAATTCGCAT GGCATTTCAA CCTATCATTC ATTGGCCTAG CCGCGAGATA
AGCGGTTATG AAGCCCTTGT TAGAGGTCCA GAAGGTGAAG GGGCTGCGTG GGTATTTGCG
CGAATTAACG ATAGCAACAA ATACTATTTT GATCAGGCTT GCCGGGTTAA AGCGATAGAA
ACCGCTTCAA AGCTGGGACT CGATAAGATG CTCAGTATCA ACTTTCTGCC CAATGCAGTG
TATAACCCTG AGACCTGTAT CCGCGCGACG ATTGAAGCCG CCGACATGTA TGGGTTTGAT
ATCCACAAAA TCATGTTCGA AGTGACAGAG GGCGAACAAA TTGTCGATCG GGCGAAATTA
GTCCATATCT TCGAGAGTTA TGCTAAACGT GGTTTTATCA CCGCAATCGA TGATTTTGGC
AGTGGTTTTG CTGATTTAAG TTGGTTGGAT GCCCTGCGTC CCCAAGTGCT AAAACTCGAT
CTGACTTTGA TCCGTGATAT CGATGTCGAT AAAGAAAAAC AGCAGGCAGT GGATGAAATA
CTGCGTATTT GCCTAGAACT TAATACAAGA GTCTTGGCCG AAGGCGTTGA GAGCGAAGCC
GAACTGAATT ATCTCGCTGG AATCGGGATT GAGTATTTTC AGGGCTATTA CTTTGCTAAA
CCTAAGCTCG AACATTTAAC TACCTACGAA GAGCTGAACT TTCATGCACC ATAG
 
Protein sequence
MDFPARIKQQ TCMDCLSGKS LGFEIRMAFQ PIIHWPSREI SGYEALVRGP EGEGAAWVFA 
RINDSNKYYF DQACRVKAIE TASKLGLDKM LSINFLPNAV YNPETCIRAT IEAADMYGFD
IHKIMFEVTE GEQIVDRAKL VHIFESYAKR GFITAIDDFG SGFADLSWLD ALRPQVLKLD
LTLIRDIDVD KEKQQAVDEI LRICLELNTR VLAEGVESEA ELNYLAGIGI EYFQGYYFAK
PKLEHLTTYE ELNFHAP