| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3735 |
|---|
| Symbol | |
|---|
| ID | 4843320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 4376659 |
|---|
| End bp | 4377891 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640121002 |
|---|
| Product | RND family efflux transporter MFP subunit |
|---|
| Protein accession | YP_001052078 |
|---|
| Protein GI | 126175929 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTACAC GAACGCTGTT TACACAAACG CTGTTTATAC AAAGAGTGAC TGAACGAGCA
CGCAGTGCAT GCGATATTTC ATTAAAAAGC CCCCATCATC TCCCAAAGGC GCCCTTATTC
GCGCCTTTGA CGTTTCTATT GGCGAGTCTT TTCACCTTAA CCCCTATAGC CGTATCTGCG
GCGGACAAGG TCGACGTTAT CCCTGTGACG GTCGAGGCCA TTAAAGAAAC CTCCTTTGCC
GATGTCGTCA ATGAAGTCGG TAAAATTAAC GCCATTGATT CGGCGATACT CAACTTTAAC
GCCAGCGAAA AAATCAGTGC CATTCATTTT AGTAACGGCG ACAAAGTGAC GAAAGGCCAA
GTGATTGCCG AGCAAGATAA CACTAAGGCC AAGGCCGATT TAGACAAGGC TAAGAGCACC
TTAGCACTGG CGAAAACTAA GCTTGAGCGT ATTGAAGACC TGCTGATCAA AGAGCCTTTC
GCACTCGCCA AGCAAGATGT GGATGAGCTG CGGGAAAATG TGAATCTGGC CGATGCCGAT
TTTCGCCAGA AACAAGCGAC CATGAACGAT TACTTGATCA AGGCGCCCTT CGACGGTCAG
CTGACAAGCT TTAGCCAGTC CATCGGCAGC CAAATTGGCG CAGGTACAGC CTTAGTCACT
CTCTATAGTT TAAATCCCGT CGAAGTCCGT TATGCCATCA GCCAGAACGA TTTTGGTAAG
GCGCAAAAAG GCCAGAAGGT AAATGTAACT GTCGAAGCTT ATGGCAATAA GGTGTTCAAA
GGGTTAGTTA ACTATGTGGC TCCAGCGGTG GATGAAAGCT CAGGACGAGT TGAAGTGCAC
GCCGCCCTTG ACAACCCAGA GTTCAAACTG GCGCCCGGCA TGTTCGCCAA TATTAAGCAG
TTCTATAGCC GTGGGATTAA ACGCTTATTA GTGCCGCAAA ATTCGATTAT CGCCAATAAC
GACGAACGCT TTGTCTGGTT AGTGCGGGGC GATAGCGCTG TAAAACAAGT GGTTAAACTC
GCGCAAAACA CCAACGACGG TTATGCGGTC GTGACCGAAG GTTTAGCCGA AGGCGATCTC
GTGGTTAAGA CGGGCATGCA AAACCTCAAG TCCGATAGCA AGATCAAAGT CATTCAGGAT
AAAAACACGG CCGATAAAGC TTCAGCCTCC AGTTCCAACT CAGGTGCGGG TGCTACTCCA
AGTCCTGAAC CTAGCACTGA GGGGGCCGAA TAA
|
|---|
| Protein sequence | MFTRTLFTQT LFIQRVTERA RSACDISLKS PHHLPKAPLF APLTFLLASL FTLTPIAVSA
ADKVDVIPVT VEAIKETSFA DVVNEVGKIN AIDSAILNFN ASEKISAIHF SNGDKVTKGQ
VIAEQDNTKA KADLDKAKST LALAKTKLER IEDLLIKEPF ALAKQDVDEL RENVNLADAD
FRQKQATMND YLIKAPFDGQ LTSFSQSIGS QIGAGTALVT LYSLNPVEVR YAISQNDFGK
AQKGQKVNVT VEAYGNKVFK GLVNYVAPAV DESSGRVEVH AALDNPEFKL APGMFANIKQ
FYSRGIKRLL VPQNSIIANN DERFVWLVRG DSAVKQVVKL AQNTNDGYAV VTEGLAEGDL
VVKTGMQNLK SDSKIKVIQD KNTADKASAS SSNSGAGATP SPEPSTEGAE
|
|---|
| |