Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3712 |
Symbol | |
ID | 4843352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 4338241 |
End bp | 4339344 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640120979 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001052055 |
Protein GI | 126175906 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.975013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAT ATCGACTCTT GCCACTGGCT ATGCTGCTTC CAGACCTGCT CAGTGGTTGT TCGCCTGCTG AAAGTTCAGT ACAAGTGGAC ACTGTCCGTC CGGTTAAACT GTTTGAAGTG CTCAATGTAG AAGCTGGAGA TTTTAGAACC TTTCCAGCCC GCGTTTCCGC TAACAGCCGC GCCGAATTGT CGTTCCGTAT TTCTGGGCAA TTAACCGAAC TGACATTAGT CGAGGGCCAA AGAGTCGCTC AAGGTAGCCT GCTCGCGCAG CTTGACGACA GGGATGCCAA AAATAACTTA ATGACCCGAG AGGCCGAACA CGAACTGTTA GCCGCCGACT TTAAACGTAA GGTCGAGCTG CTCAATCGTA AGCTGATTTC ACAATCTGAG TTTGATAGCA CTCAAGCGCA GCTCAAATCG GCCAAGGCCG CCCTTGCGGC AGCACGCGAT CAGCTGAGTT ACACCCGCTT AACCGCGCCC TTTAGCGGCA CGATTGCTAA ACGTTTAGTG GATAACCACC AAATAGTGCA GGCCAATCAA GGGGTGTTAA CACTGCAAAA CAACAACTTG CTCGATGTGA GCATTCAAGT TCCCGAGTCG ATGGCGGCGG GGCTGAAGCA ATATACCGAT CAAGCTCACT TTACCGCTAA GGTGCGTTTT AGCGCCTTTC CCGAGCAGAG TTTCGACGCC AAGTTTAAAG AATACTCCAC CCAAGTCACC CCAGGTACTC AAGCCTATGA AGTGGTATTT TCATTGCCTC AACCTCAAGA TATTCAATTA CTTCCGGGGA TGAGCGCCGA GCTAACCTTG GCCTTAGTTA AAGATCCAAG CGCCCTTGCA TCCAGCATAG TGCCCATGAC TGCCATCGAT AAACGCGATC AAGATGGCCA AGTGCAAGTG TGGGTTTATC AAACCCAATC GGGTGAAGTC AAACCCACTA TGGTGACCCT AGGACGCGTG AGTAACCAAG GCGTTGAGAT TTTAACGGGT ATCAACAAGG GCGATCTTAT CGTCAGCGCT GGCGTGTCTC AATTATCCGC TGGCATGAAA GTCAAACCAC TACTATTGCG CGACAATTAC CCTGACCGGT TCAGCGACAA TTAG
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Protein sequence | MKSYRLLPLA MLLPDLLSGC SPAESSVQVD TVRPVKLFEV LNVEAGDFRT FPARVSANSR AELSFRISGQ LTELTLVEGQ RVAQGSLLAQ LDDRDAKNNL MTREAEHELL AADFKRKVEL LNRKLISQSE FDSTQAQLKS AKAALAAARD QLSYTRLTAP FSGTIAKRLV DNHQIVQANQ GVLTLQNNNL LDVSIQVPES MAAGLKQYTD QAHFTAKVRF SAFPEQSFDA KFKEYSTQVT PGTQAYEVVF SLPQPQDIQL LPGMSAELTL ALVKDPSALA SSIVPMTAID KRDQDGQVQV WVYQTQSGEV KPTMVTLGRV SNQGVEILTG INKGDLIVSA GVSQLSAGMK VKPLLLRDNY PDRFSDN
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