Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3694 |
Symbol | |
ID | 4841557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 4315819 |
End bp | 4317813 |
Gene Length | 1995 bp |
Protein Length | 664 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640120961 |
Product | diguanylate cyclase with PAS/PAC sensor |
Protein accession | YP_001052037 |
Protein GI | 126175888 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGACTC AGTTCGCGCG CACATTAGCT ATTTTACGGC AACGAACTCG CTCAACCGTT GCTAAGGTTC TGTTGATCAT CAGCATGTTT ATCGGGATTT GTATCGCCCT CGTCGGCCTA GTGTATATTC AAGGCAATAT ATTTGATGGT GTACGCACCT ATGTCCGCGG TGAAGGCTTG TGGGCCAAGG CGCAAAAAGA TGCGGTACTT TATCTCACCC ATTACTCTTA TACCCAAAAT GATGTGGACT TTCAGCGTTA TCGTGCAGCG ACGAGCGTTA TGGAAGGTGA TCATCAAGCT AGGCAAGCCC TGCTCGCAAC GCCAATCGAT GAACAGGCCG CCAAACTGGG TTTTATTCAG GGCCTCAATG ACGAACGGGA TACCGACTCA CTGATCTGGT TCTTCCGTCA CTTTCAATCC AATTCCTATA TGCGGCAAGC GATTCAGCTG TGGGGCTTAG CGGATCAACG CTTCGAGTTT GTAATGCAAC TCGCCGAGAA TATGCGTATT GAAATCAATC AACTGGGTGG CAGGCCCGAA ATCCTCGCGC AATACCGCCA GCAATTGATT GATGCCAATG AAGAATTACT CAGCCTAGAA ATTGAATTTT CAGCCGTGCT CAGTGAAGGC GCACGCTGGG TCAAGCAAAT GACCTGGTTG ATTAGCCTTG GCGCCCTACT GCTGTTTATC AGTATTGGGA TCTTCGCCAG TAGGCAGATC ATTCGTAACA TCGCCAAGTC TGAACGGCAG TTACTGATCA GTGAATCTCG CTTCACTAGC CTGAAAAACT CCGACACCAT AGGGATTATT TCTTGGCAGC TCGATGGCAC CCTCCATGAT GCTAATGATC ATTTTCTCAA TATGCTCAAT TTTGACCGTG CGGATTTAAC CTCAGGCTTA ATCAACTGGC GCTCAATTAC CCCACCTGAA TATGAAACAC GAGATGCCAT TGCGATTGCA GAGTTAGAAC AGTTTGGTCA CTGCCAACAA TATGAAAAAC AACTTATCAG CAAGAGTGGT GCCTTAGTGC CTGTGATGCT AGCGGCCAGT TTTTTAAATG GCAGCAAATA TGAAGGCGTG GCTTACTTTA TGGATCTCAC CGCCAGTAAA CAGGCCGAAG ATAAACTCAG ACTCGCGGCA ACCGTGTTTA ATGCCAGCAC CGACGGCATA ATGATCACCG ATCCCCTGCT GAATATTATT TCTATCAATC AAGCCTTTAC TCATATAACT GGCTTTACCC AGCAGGATTT GCACGGCGAT GCCAACCACT TCCTCAATGA CGGGCACAAT AGTGATGACG CCCGCCAAGC CATGCTAAAT CTGCTTCAAC AGGGCGAGCA ATGGCAGGGG GAATTACTCA AACAAGTTAA ATCGGGCGAC TTACTGCCGC TCAGTGTGCG CATCAATACA GTGCGCAATG AGCATGACCG TCTGACTCAT TTTGTCATTG TGATTACCGA CATTGCCGAA CGCAAGGCAG AGGAGGAATA TCTGCGTCAT ATCGCCCATC ACGATGCCCT GACTAACCTG CCTAATCGTG TGTTATTCCA CACTAAACTT GAACAAGCCA TAGTGCACGC CCAACGGTCT GATGATATTT TTGCAATCCT TTTCTTAGAC TTAGATAACT TTAAGCCAGT GAATGACCAG TTTGGTCACG ATGTGGGAGA TAAACTATTA CAGGAAGTCG CGAAACGGCT TTCATCTGGG ATTCGCCAAA TGGATACCAT CACTCGCCTC GGAGGCGATG AGTTTGTGAT CCTGCTAGAA CACCTTGCCA ATACCCACAG AATCGGCCAA CTGATCCCTC AGATAAGCCA AGCTATTTGC GCGCCTTACA CTATCAATGG TCATCAAATC CATATCGGTG TCAGCGTCGG TTTGGCGATT TATCCAGAAA ACGGCACAGA TGCAAAAAGC CTGATCAATC ATGCTGATCA GGCCATGTAT TCGATGAAAA AAACCAATAA GACTCACCTG CAAAGCCTAG GTTAA
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Protein sequence | MGTQFARTLA ILRQRTRSTV AKVLLIISMF IGICIALVGL VYIQGNIFDG VRTYVRGEGL WAKAQKDAVL YLTHYSYTQN DVDFQRYRAA TSVMEGDHQA RQALLATPID EQAAKLGFIQ GLNDERDTDS LIWFFRHFQS NSYMRQAIQL WGLADQRFEF VMQLAENMRI EINQLGGRPE ILAQYRQQLI DANEELLSLE IEFSAVLSEG ARWVKQMTWL ISLGALLLFI SIGIFASRQI IRNIAKSERQ LLISESRFTS LKNSDTIGII SWQLDGTLHD ANDHFLNMLN FDRADLTSGL INWRSITPPE YETRDAIAIA ELEQFGHCQQ YEKQLISKSG ALVPVMLAAS FLNGSKYEGV AYFMDLTASK QAEDKLRLAA TVFNASTDGI MITDPLLNII SINQAFTHIT GFTQQDLHGD ANHFLNDGHN SDDARQAMLN LLQQGEQWQG ELLKQVKSGD LLPLSVRINT VRNEHDRLTH FVIVITDIAE RKAEEEYLRH IAHHDALTNL PNRVLFHTKL EQAIVHAQRS DDIFAILFLD LDNFKPVNDQ FGHDVGDKLL QEVAKRLSSG IRQMDTITRL GGDEFVILLE HLANTHRIGQ LIPQISQAIC APYTINGHQI HIGVSVGLAI YPENGTDAKS LINHADQAMY SMKKTNKTHL QSLG
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