Gene Sbal_3694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_3694 
Symbol 
ID4841557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp4315819 
End bp4317813 
Gene Length1995 bp 
Protein Length664 aa 
Translation table11 
GC content47% 
IMG OID640120961 
Productdiguanylate cyclase with PAS/PAC sensor 
Protein accessionYP_001052037 
Protein GI126175888 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGACTC AGTTCGCGCG CACATTAGCT ATTTTACGGC AACGAACTCG CTCAACCGTT 
GCTAAGGTTC TGTTGATCAT CAGCATGTTT ATCGGGATTT GTATCGCCCT CGTCGGCCTA
GTGTATATTC AAGGCAATAT ATTTGATGGT GTACGCACCT ATGTCCGCGG TGAAGGCTTG
TGGGCCAAGG CGCAAAAAGA TGCGGTACTT TATCTCACCC ATTACTCTTA TACCCAAAAT
GATGTGGACT TTCAGCGTTA TCGTGCAGCG ACGAGCGTTA TGGAAGGTGA TCATCAAGCT
AGGCAAGCCC TGCTCGCAAC GCCAATCGAT GAACAGGCCG CCAAACTGGG TTTTATTCAG
GGCCTCAATG ACGAACGGGA TACCGACTCA CTGATCTGGT TCTTCCGTCA CTTTCAATCC
AATTCCTATA TGCGGCAAGC GATTCAGCTG TGGGGCTTAG CGGATCAACG CTTCGAGTTT
GTAATGCAAC TCGCCGAGAA TATGCGTATT GAAATCAATC AACTGGGTGG CAGGCCCGAA
ATCCTCGCGC AATACCGCCA GCAATTGATT GATGCCAATG AAGAATTACT CAGCCTAGAA
ATTGAATTTT CAGCCGTGCT CAGTGAAGGC GCACGCTGGG TCAAGCAAAT GACCTGGTTG
ATTAGCCTTG GCGCCCTACT GCTGTTTATC AGTATTGGGA TCTTCGCCAG TAGGCAGATC
ATTCGTAACA TCGCCAAGTC TGAACGGCAG TTACTGATCA GTGAATCTCG CTTCACTAGC
CTGAAAAACT CCGACACCAT AGGGATTATT TCTTGGCAGC TCGATGGCAC CCTCCATGAT
GCTAATGATC ATTTTCTCAA TATGCTCAAT TTTGACCGTG CGGATTTAAC CTCAGGCTTA
ATCAACTGGC GCTCAATTAC CCCACCTGAA TATGAAACAC GAGATGCCAT TGCGATTGCA
GAGTTAGAAC AGTTTGGTCA CTGCCAACAA TATGAAAAAC AACTTATCAG CAAGAGTGGT
GCCTTAGTGC CTGTGATGCT AGCGGCCAGT TTTTTAAATG GCAGCAAATA TGAAGGCGTG
GCTTACTTTA TGGATCTCAC CGCCAGTAAA CAGGCCGAAG ATAAACTCAG ACTCGCGGCA
ACCGTGTTTA ATGCCAGCAC CGACGGCATA ATGATCACCG ATCCCCTGCT GAATATTATT
TCTATCAATC AAGCCTTTAC TCATATAACT GGCTTTACCC AGCAGGATTT GCACGGCGAT
GCCAACCACT TCCTCAATGA CGGGCACAAT AGTGATGACG CCCGCCAAGC CATGCTAAAT
CTGCTTCAAC AGGGCGAGCA ATGGCAGGGG GAATTACTCA AACAAGTTAA ATCGGGCGAC
TTACTGCCGC TCAGTGTGCG CATCAATACA GTGCGCAATG AGCATGACCG TCTGACTCAT
TTTGTCATTG TGATTACCGA CATTGCCGAA CGCAAGGCAG AGGAGGAATA TCTGCGTCAT
ATCGCCCATC ACGATGCCCT GACTAACCTG CCTAATCGTG TGTTATTCCA CACTAAACTT
GAACAAGCCA TAGTGCACGC CCAACGGTCT GATGATATTT TTGCAATCCT TTTCTTAGAC
TTAGATAACT TTAAGCCAGT GAATGACCAG TTTGGTCACG ATGTGGGAGA TAAACTATTA
CAGGAAGTCG CGAAACGGCT TTCATCTGGG ATTCGCCAAA TGGATACCAT CACTCGCCTC
GGAGGCGATG AGTTTGTGAT CCTGCTAGAA CACCTTGCCA ATACCCACAG AATCGGCCAA
CTGATCCCTC AGATAAGCCA AGCTATTTGC GCGCCTTACA CTATCAATGG TCATCAAATC
CATATCGGTG TCAGCGTCGG TTTGGCGATT TATCCAGAAA ACGGCACAGA TGCAAAAAGC
CTGATCAATC ATGCTGATCA GGCCATGTAT TCGATGAAAA AAACCAATAA GACTCACCTG
CAAAGCCTAG GTTAA
 
Protein sequence
MGTQFARTLA ILRQRTRSTV AKVLLIISMF IGICIALVGL VYIQGNIFDG VRTYVRGEGL 
WAKAQKDAVL YLTHYSYTQN DVDFQRYRAA TSVMEGDHQA RQALLATPID EQAAKLGFIQ
GLNDERDTDS LIWFFRHFQS NSYMRQAIQL WGLADQRFEF VMQLAENMRI EINQLGGRPE
ILAQYRQQLI DANEELLSLE IEFSAVLSEG ARWVKQMTWL ISLGALLLFI SIGIFASRQI
IRNIAKSERQ LLISESRFTS LKNSDTIGII SWQLDGTLHD ANDHFLNMLN FDRADLTSGL
INWRSITPPE YETRDAIAIA ELEQFGHCQQ YEKQLISKSG ALVPVMLAAS FLNGSKYEGV
AYFMDLTASK QAEDKLRLAA TVFNASTDGI MITDPLLNII SINQAFTHIT GFTQQDLHGD
ANHFLNDGHN SDDARQAMLN LLQQGEQWQG ELLKQVKSGD LLPLSVRINT VRNEHDRLTH
FVIVITDIAE RKAEEEYLRH IAHHDALTNL PNRVLFHTKL EQAIVHAQRS DDIFAILFLD
LDNFKPVNDQ FGHDVGDKLL QEVAKRLSSG IRQMDTITRL GGDEFVILLE HLANTHRIGQ
LIPQISQAIC APYTINGHQI HIGVSVGLAI YPENGTDAKS LINHADQAMY SMKKTNKTHL
QSLG