| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3535 |
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| Symbol | |
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| ID | 4841441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 4156905 |
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| End bp | 4158953 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640120804 |
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| Product | ABC transporter related |
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| Protein accession | YP_001051881 |
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| Protein GI | 126175732 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000291917 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACAACGT CATTACTTGA AATTTCAGGT TGTTATCGCA CTTTTCAGGC GGGTGAGCAG
CAACTCACTG TGCTGAAAGA TGTGAACCTG TCGATTGGCC GTGGCGAGAT GGTGGCGATA
GTGGGCGCCT CTGGCTCGGG TAAATCGACC TTAATGAACA TTCTTGGTTG TTTAGATAAG
CCGTCAAAGG GCGCGTATTT TATCAACGGC CAAGATACCT CAACGATGAA CGTGGATGAG
TTGGCGCAGC TGCGCCGCGA GCACTTTGGC TTTATCTTTC AGCGTTATCA TTTACTGGGC
GATTTAACCG CCATAGGCAA CGTCGAAGTG CCTGCTGTGT ATGCGGGTAA AGAGCGCACG
GTGCGTAAAG ACAGAGCCGA GCATTTGTTA ACGCGTTTAG GCCTTGGCGA CAGGCTCGAC
CATAAACCTA ATCAGCTCAG TGGTGGTCAA CAGCAGCGTG TCAGTGTGGC GCGAGCCTTG
ATGAATGGCG GCGATGTGAT CCTCGCCGAT GAGCCAACAG GTGCGCTGGA TAGTCACAGT
GGTGAAGAAA TGATGCAGCT GTTGCAGGAG CTGCACAGTG ACGGTCACAC CATCATTATC
GTGACCCATG ATATGCATGT GGCCCAATAT GCCGACCGCA TTATCGAAAT CAAAGACGGC
GTGATCATCA GCGATGAGCG CAGTCAGGAT AAACAAACGG CTAAGCCGCA AAGCTTGGCG
TCACAACATT CGACATCACA AAACACGAAC TCACAAAATA CGGCGCCACA AAAGCCTAAC
GGCACAGTGG TCGCCAAAAC AGTGGCAGCA AAAGACAGCT CGCGTGCGCG GGTGGCTTCG
TGGGACAGAT ATGTCGAGGC GCTTAAAATG GCGCTGGTGG CGATGTCGAC CCACAGGTTA
CGTACCTTTT TGACTATGCT CGGGATTATT ATCGGTATCG CCTCAGTGGT TTCTGTGGTG
GCCTTGGGTG AAGGCTCACA GCAGGCCATT CTCAAAAGTA TCAGTTCGAT GGGAACCAAT
ACGATTGATA TTCGCCCGGG TTCAGGTTTT GGCGATCGAC GCTCGGCACG GGTGCGTACC
TTAACGGCGA CCGATGCCAA TGCCCTTAAA AATCTGCCCT ATGTCGATAG CGTGACCCCA
AGTATTGGCT CTAGCGCGAC GGTACGTTTT GGCAATAAAG CGGTATCGGC CTCGGTGAAT
GGGGTGGGGC CGGAGTTCTT TCGCGTGCGA GGTTATGAGT TAGCGCAGGG GCAGTTTTGG
GATGATGCCA GCGTTGCAAC ACTTGCCCAA GATGCGGTGA TTGATGACAA CACCCGTAAG
GAGCTCTTTC CTAACAGTGC AGGCGCGAAT AACTCGGCCA TCGGCCAAGT GATTTTCCTC
GGGGATTTAC CTGTACGTAT CATAGGTGTG ACGCAGCCAA AAGAAAGCGC CTTTGGTAAT
AGCGATGCGC TCAATGTGTG GGTGCCTTAC ACCACAGTTT CTGGCCGTAT GATAGGTAAA
AACTATTTGG ATGGCATCAC AGTGCGACTC GATGAAACTG TGCCGAGTAA CGCGGCGGAG
CAGGGCATTA TCGCGCTGCT TAAAATGCGC CACGGCACTC AAGATTTCTT CACTATCAAT
ACCGATACCA TTAGGCAGAA CATCGAAAAA ACCACAGCAA CCATGACCTT ATTGATCTCG
GCGATCGCGG TGATTTCCCT TGTCGTTGGC GGAATTGGGG TGATGAATAT TATGTTAGTG
TCTGTGACTG AACGGACCCG TGAAATCGGG GTACGTATGG CAGTGGGCGC GCGTCAGAGT
GATATTTTGC GCCAGTTCCT TATCGAAGCC ATCTTAGTGT GTTTGTGTGG CGGAACCTTA
GGCATTGCTT TGTCCTACTT AATTGGCGTG GTGTTTGCTC AAACGGGAGG CAGTTTCCAA
ATGATTTACT CCACCACCTC CATCGTTGCC GCCTTTGCCT GTTCGACCTT AATTGGTGTG
CTATTTGGTT TCTTACCCGC CCGCAATGCG GCGCAGTTAG ATCCCGTTGA CGCATTAGCC
AGAGAGTAA
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| Protein sequence | MTTSLLEISG CYRTFQAGEQ QLTVLKDVNL SIGRGEMVAI VGASGSGKST LMNILGCLDK
PSKGAYFING QDTSTMNVDE LAQLRREHFG FIFQRYHLLG DLTAIGNVEV PAVYAGKERT
VRKDRAEHLL TRLGLGDRLD HKPNQLSGGQ QQRVSVARAL MNGGDVILAD EPTGALDSHS
GEEMMQLLQE LHSDGHTIII VTHDMHVAQY ADRIIEIKDG VIISDERSQD KQTAKPQSLA
SQHSTSQNTN SQNTAPQKPN GTVVAKTVAA KDSSRARVAS WDRYVEALKM ALVAMSTHRL
RTFLTMLGII IGIASVVSVV ALGEGSQQAI LKSISSMGTN TIDIRPGSGF GDRRSARVRT
LTATDANALK NLPYVDSVTP SIGSSATVRF GNKAVSASVN GVGPEFFRVR GYELAQGQFW
DDASVATLAQ DAVIDDNTRK ELFPNSAGAN NSAIGQVIFL GDLPVRIIGV TQPKESAFGN
SDALNVWVPY TTVSGRMIGK NYLDGITVRL DETVPSNAAE QGIIALLKMR HGTQDFFTIN
TDTIRQNIEK TTATMTLLIS AIAVISLVVG GIGVMNIMLV SVTERTREIG VRMAVGARQS
DILRQFLIEA ILVCLCGGTL GIALSYLIGV VFAQTGGSFQ MIYSTTSIVA AFACSTLIGV
LFGFLPARNA AQLDPVDALA RE
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