Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3521 |
Symbol | |
ID | 4844811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 4140380 |
End bp | 4141291 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640120790 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001051867 |
Protein GI | 126175718 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00124324 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGATT TAAACGGTAT GATGCTATTT GCAGCCGTAG TTAGAGCTAA GGGATTCTCC CAAGCTGCAC GTGAAACCGG CCACCCAAAA TCCACCATAA GTCGCAAAAT CGCGCAGCTT GAAGAACAAC TTGGCGTGCG ATTACTACAG CGCGACACCC GTAACTTGAG TCTGACCCAA GTCGGGGCAC TCTTTTACCA ACACTGTGAT TCCATTCGCA ATGAGGTGGA AGCGGCCAAG GCTGTTATCG AGAATACTCA CGATGATGTG TCAGGATCAT TACGGATTGC GATCCCGGTG TCATTTAGCC AAGAACTTAT CGCTAACCTC TGTAGCGGAT TTATGCGTTT ATATCCCAAT GTTGAATTGG ATGTCCAGTT TACCGACAAC GATATTGGTT TGGTCGGCGA AGGATATGAC ATAGCCATCA AATATGGCCC ACTTCAATCA TCGGACTTAG TCGCACGATT ACTGTTTGAA CGCCAACCGA TTTTAGTCGC AAGCCCAGGT TACTTAAAAC TCAAAGGCAC GCCCGCAACG CCAAAAGAAC TCAGCCTGCA CAGTGGTATT TTATTGGGGA CTTCTCGCTC GGCGCCGATT TGGCCACTGG GTAAAGGTTC ACGGAAAACC ATGGCAAACT TCCAGCGTAA AGTGCGGGTC AACAGCCCGA TAATGGTGAA GCAATTAGCC ATGGATGATT TTGGCATCGC CATGTTATCC AATTCGGCCT GTAAGACCGA ACTCGCTAAT GGACAGCTAG TACCGATTTT ACAAGAATGG CCGATTGAAC CCTTTAAGGT TTACGGGGTT TATTCGAGTC GACGTCAACT GGCCACTAAC ATCAGCGTCT TTTTGGATTT CTTCGTAAAA CGCTTCAGCA GCCAAGAAAG CCTGCAATCC CTCATGGGTT AA
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Protein sequence | MPDLNGMMLF AAVVRAKGFS QAARETGHPK STISRKIAQL EEQLGVRLLQ RDTRNLSLTQ VGALFYQHCD SIRNEVEAAK AVIENTHDDV SGSLRIAIPV SFSQELIANL CSGFMRLYPN VELDVQFTDN DIGLVGEGYD IAIKYGPLQS SDLVARLLFE RQPILVASPG YLKLKGTPAT PKELSLHSGI LLGTSRSAPI WPLGKGSRKT MANFQRKVRV NSPIMVKQLA MDDFGIAMLS NSACKTELAN GQLVPILQEW PIEPFKVYGV YSSRRQLATN ISVFLDFFVK RFSSQESLQS LMG
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