Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3505 |
Symbol | |
ID | 4845753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 4105297 |
End bp | 4110651 |
Gene Length | 5355 bp |
Protein Length | 1784 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640120770 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001051851 |
Protein GI | 126175702 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAAAA GTAAACTTCG TACTTTTCGC AGCAGAATCT TATCCCACAT AGCCTTGCCT CTCATTTTAA TCATGGCGAG TGTTTATGCT GTCAATGCTT GGTTTAGTTA TCTCTCCTCG GAGAAACGGC TCTACCATAG CCTTACGCAG GAGGCGAGTC ACTCGGCTTC GCGTCTGCAA TTGTTACTCG AGCACGCACA AGCAAATACC CAAGGCCTTG CTGATTTTAT TGGTTTTTTG TCAAGCAAAG AAGACATGAA TGACACTGAG AGTGTTAAAA GTGTCTTGAT GAATCGACTC AAACGTAATC CTGATTTCTT TGGCTCCGCA GTCGCGTTTA AACCCAACAC CTTTCCCAAT CGCAAACTCT TTTCTCCCTA TGTTTACCGC GACACCAGTG GTAGCGACGA TCTCCATTAT CTCGATATTG GCGCCGAGGG TTACGATTAT ACCGATGGCA CTTGGGACTG GTGGAACAAT GCCATCAATC AAGCGGCGGG CTACTGGTCA AAGGCGTACT TTGATGAGGG GGCGGGCAAT ATTCTGATGG TGACTTATTC GGCTCCTTTT GGTGAGGCGG AGCATTATTT TGGTGTCGCG ACGGTTGACT TAGCGCTAGA TGGCTTGCCA AAGCAATTAG GAATTGCGCC TAATCGGCTG GTGGTTTTAG ACGATCAAGG GCGACTGATT TATCATGTCG ATAGGGAAAA AGTGTTGGCC ACGACTTCAA CACAGTGGCT CGATAAAAAT AAATATAGGA ATGCTGACTT TTGGGCCTTA CAAGCGAAAG GACTTGATGG TCAGGCAAGG TTTGTTGACG ATAAGGATGT GGTTTACCTC GCGAGTATTG CAACCGTTCC GCAGCTAAAA TGGCGCGTCA TAGTGCTAGC GCCAGAGCAA GAATTATTCA GTTCCCTGCT CGATGATATG GCATCCATAA TACTCAATTT GAGTTTGCTA ACCCTCTTAT TATTGTTGAC TTGCTATCTG GCCGCTAAGC GACTGACTCG GCCCTTAGAG CTACTCGAGT CGGGTATCTT GTCCTTTGGG CAGGGTAAAA CCCAGCAGCT CATTGTGCCT AAAGGCGCCG TGAGTGAGAT TGTGACGCTG AGCAATACCT TCAATCAAAT GGCGGAATTA CTCGCCGAAC GTGAGCAAGC CATTCTTGAT TCCCGTGGCA ACCGCTTTGC TCGTTTGATT GATGGTATGA GTGATAAGTC TTTCTATTGT TCCCTCGATC CTGATGGCCA ACTAGCGCAA GTGAGCGAGG GGGTGACTAA GGTGCTGGGG ATTTCCCCTG ATCTGCTCAA GCGCAAATAC CAAAGACTGT TTTCGGCCAA TCCCCTCAAT GAGAAAAACT GGCAATACAC TGATTTTGCT TTAAAAGGCC AAAATGTTCC TTCGCATCAA GTGGAAATGC TGGATGATCA AGGGCATTTA AGAAGGCTCG ATGTGTTTAT GCAGCCATTA ATGTCTGACA CCGGTGAGTT AATGTCGGTC GAGATGTTAT TTACCGATGT GACAGAGCAG TTCTCAGCGG CGGTCTGGTC AAATGCGGTA CTGGAAGCCG CGCCCGAGGC CATGTTGATT GTCGATGAGC TAGGGCAAAT CGTGTTCACT AACAGTCGCT GTCTACAGCT CTTTGGATAC GAAACGGGCG CTATGCTGGG GTTGCAGGTT GAGGCGTTAT TGCCGCAAGA ATATGGAGAA AGGCATGTAC TTGAACGGCA AACATTCCTG CGAGAAGGCC GTGATAGAAG CATGGCAAAT GCCCGTCATG TGCGGGCGTT AAAAGCCGAT GGTAATGAAT TTATTGCGGA AATAGCGCTG AGTATTCTTC CCACCGCCTT TGATGGACAG AGGCAAGTGG CGGCTTCAAT ACGCGATATG ACACAAAAAC TGGCCGTTGA GCAGAAAATC CGTGATAGCG AACAGCGTTT TCGTGGGCTA GTGACGAATA TTCCCGGCGC TGTTTATCGG ACTCGCATCG GGGATGTATG GTTCATGGAA TATATCAGTG ACAATATTGC CGAGATTACG GGTTATGCAG CGAGTCAGTT TATTGAAAAT CGCCAACGTA CCTTTGCTTC GCTGATTTTA GAGGAGGATA GGCCTACATG TCATTTGCAT ATTGATAGAG CACTCGCGCA GCAAGAAACC TTTGAAGTGG AATATCGTAT TCGCCACCGC GATGGCAGTA TTCGCTGGGT ACATGAGAAA GGTAAGGCGA GTTATACCGA AGAGGGCATT CCACTCTGGT TTGACGGCAG TATCGACGAT ATTACCGAGA GTAAACTCGC GCTGGTACAG TTAGAGCAAT CGCGTCAACA GATGACCAAT ATTACTGAGT CTATTCCTTG CACTGTGTAT CAATTGCAGT GGCACTCGCC TATAGACCGA AGATTTACCT TCCTCTCTGG TGCGGCAATG AAGATGCTTG GGCTGCATCG CGATGATCTG ATGAGTAATT TTGACATCAT AGCCGAGCGG ATTTTTGATG AAGAAAGGCC CGATGTTGTG CGGGCCTTGT CGGGTCAGAG TGAAGACAGA CTGCAATGGA TACGCGAGTT TCGCTATCGC CACCCTAATG GCAGCATACG TTGGATGGAA GCGGGCGCGA GCGGTCATTT GGGTGAAGAG GGTGCCATCA CGTGGAATGG TTATGTGATG GACATTACCC AACGCAAAAC CATAGAGCAA GAGTTAGCTC TCAGTGAGGC GCACTTTAAG GCGCTGTTCG ATGGGGCGAC CATTGGCATA GTCAATGTTG ATATTAAAGG CGTTATTTTA GATTGTAATG ACCAATTCTG TGCCGATATG GCGCTGTCAC GTAACCATTT ACGTAATACT GCTATTTTTG AGGTTCTCAG TGAGCAAGAT CAACCCATAG CCAAGGCGCA ATTTCAGGAG TTGGTTGAAG GTAAGATTGA CCATTATCGC GGCGAGCGCA GTTTTATTCG TCCTTCCGGT GCGCCTTTGT GGATGACAGT CAATGTGTCG GCACTGCTTG ATGCCCAAGG ACAATTTGAA TCGGCCGTGA TCAGCATGGT CGATATGACA GAGCTTAAAT TGCTCTCAGA TGAACTGTTA CTCGCCAAAG AGCAAGCCGA TGCGGCCAGT AAAGCCAAAG GTGACTTCTT GGCGAATATG TCCCACGAAA TCCGTACTCC AATGAATGCC ATTATTGGCA TGTCCCAGCT GTGCTTGCAG ACCGAATTAG ATAAAAAACA GAAGAATTAT GTAGAGAAGA TTGAGCGGGC ATCGCAGTCT TTGCTGTCGA TTATCAATGA CATTCTGGAT TTCTCTAAGA TTGAAGCGGG TAAGTTAGAT ATAGATTCAG TACCTTTTCA GCTCGATACT ATGTTGGAAG ATCTCAGCGA TATGTTTTCT GAGAAAGCTG CCCACAAACA GATTGAATTA TTGTTCGCCG TTGCGCCCAA CGTGCCTCGT TATCTGTTAG GGGATTCGCT GCGATTAGGC CAAGTCTTGA TTAACCTGAT GAATAACGCC ATTAAGTTCA CTGAACGCGG TGAGGTCTTG CTGTCGCTAA GCTTAGTTGA GCAGCAAGAT GATGATGTCG TGCTGCGTTT TAGCGTGCGT GACAGCGGCA TAGGCTTAAC TGAGCAGCAG CAAGCAAAAT TGTTTAAATC CTTTACCCAA GCGGATACTT CAACCACCCG TAAATACGGT GGCACAGGTT TAGGTTTGGC TATCTGTAAG CAGCTAGTCG AACTCATGGG CGGGAAGATA GGGGTTGAAA GTCAGTTCGG TCATGGCAGC ACTTTCTATT TCACGGTCAA GTTGCACATT TCCGATGGTC AGAAATTAGT ACTCGAGCAA GAGCTTGAGG GCATGTCTGT GCTGGTGGTC GATGATAACG CGACCGCTAG AGATATTATG CGCACTACGC TCGAAAGTAT GGGCTTTAGG GTCGATACGG TTCGCTCGGG TGAAGAAGCG ATAAGCCGCT GCCTACTGCA AGCCTATGAA GTGGCGTTAA TTGATTGGAA AATGCCCAAC ATGGATGGGC TGGAAACCGC GCGTCAAATC CAATTGCAGG CTCAGTCGCA ATCTCAATCA CAACCTCAGT CTCATCCTCA GCCCAAAATA TTGATGGTAT CTGCCCATGC GGATCATGAG TTCCTCACTC AAATTGAGCA ACTGGCTTTA GCTGGATACA TCAGTAAACC CATCAGTGCC TCACGCTTAC TCGACGGCAT AATGAATGCG ATTGGCCGCG AAGGCATATT GCCCGTGAGG CGCCGCACCG AAGAGTTGGC TCCGCAGTTG TTAGTGCCAC TGCAAGGGAA GCGTATCCTA TTAGTGGAAG ATAACGAGAT GAATCTCGAA GTCGCCAGCG AGTTTTTAGA GCAAGTGGGG ATTATTCTAT CCATAGCGAC CAATGGTCAA ATCGCCTTAG ACAAACTGTC GCAGCAGCAT TTCGATCTAG TATTAATGGA CTGCCAAATG CCGGTGATGG ATGGCTACCA AGCCACTCAG GCGATAAGAA AAAGGCCTGA GTTGGCAAAT TTACCCGTCG TCGCCATGAC TGCCAATGCG ATGGCTGGCG ATAGGGACAT GTGCATCAGG GCGGGCATGA ACGACCATAT AGCCAAACCG ATAGAAGTGA ATGTTCTCTA TCAAACCCTG TTGAAATACC TCGCACCCGC ATCAGAAACG GCTGCAGTAG ATACCTTTAC TCAATCGATA TTGAGTAACA CTAAGGGTGA GGCAGGCAAT AGTGCAGAAC AAACCGTATT GCTTAAGTGG CCAGAGCACC CAGAGCTGGA TATCGATAGA GGTTTGCAAC TGGTGCAACA CTCTACGCGG CTTTATCAAC GCATATTTGA TCGTTTCGTG AGCAGTCAGC GTAATGTGGT GGAACAGGTT CGCAAAGCTA TCGCGGCGAA TCAAATCGAA GATGCGGTGC GTATTGCCCA TACCCTTAAA GGCTTAGCGG GCAATTTAAG CTCGGCTAAA TTGGTGGAGT TAGCGCGTTT ACTTGAGTTG CATTTAACTG AAAATGCGCC CTTTGAAGAT GAGTTAGTTC AAATTCAACC GCTAGTGGCT TCTATTTGTG ATGCGATTGA ATACGCCAAA CCCGCTGCGG TGAATCAAGC CGAACCCCAA GCCGTTGATT TGTTATCTGC TGAGGATTTA AGGGCGGCAT TACAGGCCTT GCGGCAGAAC TTAGATGATG CCGATGCCAG CGCAGTGGCA AAAATTGATG CCTTAAAGCC GCAGGTGAAC AGTGCAATGT GGCAAGCGTT AAGCCCTGCC TTGTCTATGA TTAATCAGTA CCAGTTTGAT GAGGCGATCG ACTTGATTGA TGATGTCATT GCTCAGTTAG GATAA
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Protein sequence | MDKSKLRTFR SRILSHIALP LILIMASVYA VNAWFSYLSS EKRLYHSLTQ EASHSASRLQ LLLEHAQANT QGLADFIGFL SSKEDMNDTE SVKSVLMNRL KRNPDFFGSA VAFKPNTFPN RKLFSPYVYR DTSGSDDLHY LDIGAEGYDY TDGTWDWWNN AINQAAGYWS KAYFDEGAGN ILMVTYSAPF GEAEHYFGVA TVDLALDGLP KQLGIAPNRL VVLDDQGRLI YHVDREKVLA TTSTQWLDKN KYRNADFWAL QAKGLDGQAR FVDDKDVVYL ASIATVPQLK WRVIVLAPEQ ELFSSLLDDM ASIILNLSLL TLLLLLTCYL AAKRLTRPLE LLESGILSFG QGKTQQLIVP KGAVSEIVTL SNTFNQMAEL LAEREQAILD SRGNRFARLI DGMSDKSFYC SLDPDGQLAQ VSEGVTKVLG ISPDLLKRKY QRLFSANPLN EKNWQYTDFA LKGQNVPSHQ VEMLDDQGHL RRLDVFMQPL MSDTGELMSV EMLFTDVTEQ FSAAVWSNAV LEAAPEAMLI VDELGQIVFT NSRCLQLFGY ETGAMLGLQV EALLPQEYGE RHVLERQTFL REGRDRSMAN ARHVRALKAD GNEFIAEIAL SILPTAFDGQ RQVAASIRDM TQKLAVEQKI RDSEQRFRGL VTNIPGAVYR TRIGDVWFME YISDNIAEIT GYAASQFIEN RQRTFASLIL EEDRPTCHLH IDRALAQQET FEVEYRIRHR DGSIRWVHEK GKASYTEEGI PLWFDGSIDD ITESKLALVQ LEQSRQQMTN ITESIPCTVY QLQWHSPIDR RFTFLSGAAM KMLGLHRDDL MSNFDIIAER IFDEERPDVV RALSGQSEDR LQWIREFRYR HPNGSIRWME AGASGHLGEE GAITWNGYVM DITQRKTIEQ ELALSEAHFK ALFDGATIGI VNVDIKGVIL DCNDQFCADM ALSRNHLRNT AIFEVLSEQD QPIAKAQFQE LVEGKIDHYR GERSFIRPSG APLWMTVNVS ALLDAQGQFE SAVISMVDMT ELKLLSDELL LAKEQADAAS KAKGDFLANM SHEIRTPMNA IIGMSQLCLQ TELDKKQKNY VEKIERASQS LLSIINDILD FSKIEAGKLD IDSVPFQLDT MLEDLSDMFS EKAAHKQIEL LFAVAPNVPR YLLGDSLRLG QVLINLMNNA IKFTERGEVL LSLSLVEQQD DDVVLRFSVR DSGIGLTEQQ QAKLFKSFTQ ADTSTTRKYG GTGLGLAICK QLVELMGGKI GVESQFGHGS TFYFTVKLHI SDGQKLVLEQ ELEGMSVLVV DDNATARDIM RTTLESMGFR VDTVRSGEEA ISRCLLQAYE VALIDWKMPN MDGLETARQI QLQAQSQSQS QPQSHPQPKI LMVSAHADHE FLTQIEQLAL AGYISKPISA SRLLDGIMNA IGREGILPVR RRTEELAPQL LVPLQGKRIL LVEDNEMNLE VASEFLEQVG IILSIATNGQ IALDKLSQQH FDLVLMDCQM PVMDGYQATQ AIRKRPELAN LPVVAMTANA MAGDRDMCIR AGMNDHIAKP IEVNVLYQTL LKYLAPASET AAVDTFTQSI LSNTKGEAGN SAEQTVLLKW PEHPELDIDR GLQLVQHSTR LYQRIFDRFV SSQRNVVEQV RKAIAANQIE DAVRIAHTLK GLAGNLSSAK LVELARLLEL HLTENAPFED ELVQIQPLVA SICDAIEYAK PAAVNQAEPQ AVDLLSAEDL RAALQALRQN LDDADASAVA KIDALKPQVN SAMWQALSPA LSMINQYQFD EAIDLIDDVI AQLG
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