Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3458 |
Symbol | |
ID | 4844657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 4053970 |
End bp | 4057164 |
Gene Length | 3195 bp |
Protein Length | 1064 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640120723 |
Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_001051804 |
Protein GI | 126175655 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00916432 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCGA TAACTATGTT CAAAGCGAGT GAAGTGCTGG CAGGCCGCTA CGATTCTGCC AATCTCGACG AACTGTTCAA AGCGATCAGC GACAACTACA TTGTCGATGA AGAACAATAC TTGTCAGAGT TGATCCAACT AGTTCCCTCC AGTGATGAAG CCATAGAGCG CGTCACTCGT CGTGCCCACG AACTGGTTAA CAAGGTTCGT CAATTCGATA AAAAAGGTTT GATGGTTGGC ATAGATGCCT TCCTGCAACA GTACAGCTTA GAAACACAGG AAGGCATTAT CCTGATGTGT TTAGCCGAAG CGCTGCTGCG TATTCCTGAT GCGGCCACTG CCGATGCACT GATTGAAGAC AAGCTTTCAG GCGCTAAGTG GGATGAGCAC ATGAGTAAGA GTGATTCTGT ACTCGTTAAC GCATCGACCT GGGGCCTTAT GCTCACGGGT AAAATTGTCA AGCTCGATAA AAAAATCGAT GGCACCCCAA GCAACTTACT GAGCCGCTTA GTTAATCGTC TCGGCGAGCC AGTGATCCGC CAAGCAATGA TGGCCGCGAT GAAGATCATG GGTAAGCAGT TTGTGCTGGG CCGCAACATG AAAGAAGCCC TGAAGAACAG TGAAGACAAG CGTAAGTTAG GCTATACCCA TTCCTACGAC ATGCTGGGCG AAGCGGCGTT AACGCGTAAA GATGCTGAGA AATACTATAC CGATTACGCC AATGCGATCA CTGAGCTCGG TGCTCAAAGC TATAACGAAA ATGAATCACC GCGCCCAACG ATTTCAATCA AGCTATCGGC ATTGCACCCA CGTTACGAAG TGGCCAATGA AGACCGCGTT TTAACTGAAC TGTACGACAC AGTTATCCGC CTGATTACAC TGGCTCGCGG CTTAAATATC GGTATTTCTA TCGATGCTGA AGAAGTCGAT CGCCTCGAGT TGTCACTGAA ACTGTTCCAA AAACTATTTA ATTCAGAAGC GGCAAAAGGC TGGGGATTAC TCGGTATTGT GGTTCAAGCT TACTCTAAGC GTGCCCTGCC CGTACTGGTT TGGTTAACTC GCCTTGCGAA AGAGCAAGGG GATGAAATCC CCTTGCGTCT GGTAAAAGGC GCCTATTGGG ATAGCGAACT GAAATGGGCC CAACAAGCTG GCGAAGCCGC TTACCCACTT TACACTCGCA AAGCCGGTAC TGACGTTTCT TACCTCGCCT GCGCCCGCTA CTTGTTATCG GATGCGACTC GCGGCGCTAT CTACCCACAA TTTGCTAGCC ACAATGCGCA AACCGTTGCG GCGATTTCAG ATATGGCGGG AGATCGTCAC CATGAGTTCC AACGCTTACA CGGCATGGGA CAAGAGCTGT ACGACACGAT TTTGTCGGAA GCTGGCGCCA AATCGGTACG TATTTATGCG CCCATCGGTG CCCATAAGGA TCTACTGCCC TACTTAGTGC GTCGTCTGCT GGAAAACGGG GCCAACACTT CGTTCGTCCA CAAGCTCGTT GATCCTAAAA CCCCAATCGA CTCATTAGTG GTGCATCCGC TAAAAACGCT GACGGGCTAT AAAACCCTGG CTAACAATAG AATCGTTTTA CCTGCCGATA TTTTCGGTAG TGATCGCAAA AATTCCAAGG GACTCAATAT GAACATCATT TCCGAATCTG AGCCATTTTT CGCGGCAATA GAACAGTTTA AAAATACCCA ATGGCAAGCA GGCCCTCTGG TTAACGGCAA AACCTTAACC GGTGAGCACA AAACCATAGT CAGCCCATAC GACACCACCC AAACAGTGGG TCAAGTAGCC TTTGCCGATG ATGCGGCCAT AGAACAAGCA CTCGCGTCTG CTGAAGCGGC GTTTGCCTCA TGGGCACGTA CGCCGGTTGA AACCCGTGCC TCTGCGCTGC AAAAACTCGC TGACTTATTA GAAGAAAACC GCGAAGAATT GATCGCCTTG TGTACCCGTG AAGCGGGCAA GAGCATTCAA GACGGTATCG ACGAAGTACG TGAAGCCGTT GATTTCTGTC GTTACTACGC AGTACAAGCC AAGAAAATGA TGGCGAAGCC TGAACTGCTT CCTGGCCCAA CAGGAGAGCT GAACGAACTG TTCCTCCAAG GCCGCGGCGT ATTCGTGTGT ATTAGCCCGT GGAACTTCCC ATTGGCCATC TTCCTCGGCC AAGTGTCTGC GGCATTAGCG GCAGGTAACA CAGTGATCGC GAAACCTGCG GAGCAAACCT CGATTATTGG TTACCGTGCA GTACAACTTG CTCACCAAGC AGGTATTCCT GTTGAGGTTC TGCAATTCCT ACCAGGTACG GGTGCGACTG TGGGTAGCGC AATTACAGCC GATGAACGTA TCGGCGGCGT ATGCTTTACC GGTTCAACTG GCACTGCAAA ACTGATTAAC CGTACACTGG CCAACCGTGA TGGCGCGATT ATTCCTTTAA TCGCCGAAAC TGGTGGTCAA AATGCCATGG TAGTGGACTC AACCTCACAA CCTGAGCAAG TGGTTAACGA TGTGGTTTCA TCGTCATTCA CCAGCGCGGG TCAACGCTGT TCAGCATTGC GCGTACTCTT CCTACAAGAA GACATCGCCG ATCGCGTGAT CGAAGTGCTG CAAGGCGCGA TGGATGAATT AGTGATTGGC AACCCAAGCT CAGTGAAAAC TGACGTAGGC CCAGTGATTG ACGCCACCGC CAAAGCCAAC TTAGATGCGC ACATCGACCA CATAAAGCAA GTCGGCAAGC TTATTAAGCA AATGCCGTTG CCTGCTGGTA CAGAGAACGG TCACTTCGTT TCACCCACTG CGGTTGAAAT CGATTCGATT AAAGTGCTTG AGAAAGAACA CTTTGGCCCA ATCCTGCACA TTATTCGCTA CAACGCTGCA GAGCTAAGCC AAGTGATCAA CGAGATCAAT AGCACAGGCT TTGGCTTAAC CTTAGGCATC CACAGCCGTA ACGAAGGCCA TGCCCTTGAG GTTGCAGATA AAGTCAACGT GGGTAACGTG TACATTAACC GTAACCAAAT CGGCGCTGTG GTGGGTGTAC AGCCTTTCGG CGGTCAAGGC CTGTCAGGCA CTGGTCCTAA AGCCGGTGGC CCACACTACT TAACCCGTTT TGTGACTGAA AAGACTCGCA CCAACAACAT CACCGCCATA GGTGGTAATG CAACGTTATT GTCACTGGGT GATGGCGAAG AATAA
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Protein sequence | MEAITMFKAS EVLAGRYDSA NLDELFKAIS DNYIVDEEQY LSELIQLVPS SDEAIERVTR RAHELVNKVR QFDKKGLMVG IDAFLQQYSL ETQEGIILMC LAEALLRIPD AATADALIED KLSGAKWDEH MSKSDSVLVN ASTWGLMLTG KIVKLDKKID GTPSNLLSRL VNRLGEPVIR QAMMAAMKIM GKQFVLGRNM KEALKNSEDK RKLGYTHSYD MLGEAALTRK DAEKYYTDYA NAITELGAQS YNENESPRPT ISIKLSALHP RYEVANEDRV LTELYDTVIR LITLARGLNI GISIDAEEVD RLELSLKLFQ KLFNSEAAKG WGLLGIVVQA YSKRALPVLV WLTRLAKEQG DEIPLRLVKG AYWDSELKWA QQAGEAAYPL YTRKAGTDVS YLACARYLLS DATRGAIYPQ FASHNAQTVA AISDMAGDRH HEFQRLHGMG QELYDTILSE AGAKSVRIYA PIGAHKDLLP YLVRRLLENG ANTSFVHKLV DPKTPIDSLV VHPLKTLTGY KTLANNRIVL PADIFGSDRK NSKGLNMNII SESEPFFAAI EQFKNTQWQA GPLVNGKTLT GEHKTIVSPY DTTQTVGQVA FADDAAIEQA LASAEAAFAS WARTPVETRA SALQKLADLL EENREELIAL CTREAGKSIQ DGIDEVREAV DFCRYYAVQA KKMMAKPELL PGPTGELNEL FLQGRGVFVC ISPWNFPLAI FLGQVSAALA AGNTVIAKPA EQTSIIGYRA VQLAHQAGIP VEVLQFLPGT GATVGSAITA DERIGGVCFT GSTGTAKLIN RTLANRDGAI IPLIAETGGQ NAMVVDSTSQ PEQVVNDVVS SSFTSAGQRC SALRVLFLQE DIADRVIEVL QGAMDELVIG NPSSVKTDVG PVIDATAKAN LDAHIDHIKQ VGKLIKQMPL PAGTENGHFV SPTAVEIDSI KVLEKEHFGP ILHIIRYNAA ELSQVINEIN STGFGLTLGI HSRNEGHALE VADKVNVGNV YINRNQIGAV VGVQPFGGQG LSGTGPKAGG PHYLTRFVTE KTRTNNITAI GGNATLLSLG DGEE
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