| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3448 |
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| Symbol | |
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| ID | 4844647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 4043923 |
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| End bp | 4045647 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640120713 |
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| Product | spermidine synthase |
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| Protein accession | YP_001051794 |
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| Protein GI | 126175645 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4262] Predicted spermidine synthase with an N-terminal membrane domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0193946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGAAA CCAGCTTAAC CCCCTCGGCG GCTAAACCTA GCCGCCTAGG TTGGTTCGAC
GATGTCCTAT TATTGGGCAT TATGGCCGTA TTAGCAGGCT GCGGCCTGAT TTACGAATAT
CTTTTATCCC ACTATGCGGG GCGCATTTTA GGCGCATTAG AAGCCGCCAT CTACACCATG
ATTGGCTTGA TGATAGTCTC CATGGGGCTA GGTGCCTTCG CCGCTCGTAA GATCCGTGAT
GCCTTTACCG GTTTTGTGAT CTTAGAACTC ACAGTCGCAC TCTGTGGCTC ACTCGCCATT
TTAATCACAG CGGCGGTGAT TGGTTTTGGC CAACAACTGC CCTTAATGAT TGCCAACACC
TTAGGTTTAC CACCAGATCA ACTACCCGAA GGCGGCATGA TAGGCTCGCT GCAAAAACTC
AGCGAATACT TACCCTATGT GTGGGGCGTG TTACTGGGCC TGATGATAGG TATGGAAATC
CCACTGATCG CCAGAGTGCG CCAGTCTCTT TCTGACGAGC ATTTGCTGCA CAATGCGGGG
ACAATTTACG GCGCCGATTA CATAGGTGCA GGCATAGGTG CTGCCATTTG GGTGGGCTTT
ATGCTCGCCA TCGATATCCA ACTTGCCGCC GCCTTAACTG CCAGTTTTAA CCTGTTGGCG
GGTTTTGTGT TTATCTGGCG CTTCTGGCCT AAAATCCGCC GCCCTAAATT GCTTTTGACT
GGGCACTTTA TCGTGACTGG CATTTTACTC GTGTTAGCCA TCCACGGCCC ACGCTGGGAA
CAAGAATTTA ATAATTTGCT CTATAAAGAC AAAGTGGTTT ACGCCAAGGC GACACGCTTC
CAACAGTTGA CCTTCACCGA GCGACTGCGC GGTAACGGTC TGCCGCCCGT TTATGCGTTA
TACATCAATG GTCGCTTACA GTTTTCTAGC ATAGACGAAC ACATCTACCA TGCGTTTCTC
GTGCATCCCA CACTCGCAGC CAGTGCCCGT CATCACAAGG TGTTGATCAT TGGCGGCGGC
GATGGACTCG GTCTTAAGCA AGTGTTGCGC TGGGAGCCTG AGCAAGTGAC GCTGCTCGAT
CTCGATGTCG GCCTAGTGCA ATTATTTAAG TCGCCCGATA CGGATATGCC CGAGCGTTTG
AGCCGCGCTA TGTTGACGCT CAACGGCAAT GCGCTAAACG ATCCCCGTGT CACTGTGATC
AACGACGATG CATTTAATGG CGTCGATAAG CTGATTGCAA CAGGCGTGAA ATACGATGCA
ATTATCGTGG ACTTGCCCGA TCCGAGCCAT CCCGATCTTA ATAAGCTGTA TTCGGATTAT
TTCTACCGTA AATTAAAGGA ACTTATGAGC AGTGATGGCG CTCTGACTGT ACAGTCAACA
TCGCCTTACC ATGCCCCTAA GGCCTTTATT TCGGTAGCAA AAACCTTGGC ATTGGCAGGA
TTTGACGTCA AACAGTACCA CCATAATGTG CCCAGTTTTG GCGAATGGGG CTGGAGTATC
GCCACCGCAG GCGGACTCGA TGCACAACAC AGATTAGCTA AGTTAACTGA GCTGCCCATC
AAAGATGACT GGCTCACCTT AGGTTTAGTG GATGGTGCCT TTGAGTTTCC AGCAAATTTT
TATCAAGATG CCGCCAAAAT AAAACCCAAT GAATTGGGTT CGTTGCAGCT GTATCACTAC
CATTTGCAAG ATTGGTCCGA GAATCAGGGA CTGAATCTTT TTTAA
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| Protein sequence | MQETSLTPSA AKPSRLGWFD DVLLLGIMAV LAGCGLIYEY LLSHYAGRIL GALEAAIYTM
IGLMIVSMGL GAFAARKIRD AFTGFVILEL TVALCGSLAI LITAAVIGFG QQLPLMIANT
LGLPPDQLPE GGMIGSLQKL SEYLPYVWGV LLGLMIGMEI PLIARVRQSL SDEHLLHNAG
TIYGADYIGA GIGAAIWVGF MLAIDIQLAA ALTASFNLLA GFVFIWRFWP KIRRPKLLLT
GHFIVTGILL VLAIHGPRWE QEFNNLLYKD KVVYAKATRF QQLTFTERLR GNGLPPVYAL
YINGRLQFSS IDEHIYHAFL VHPTLAASAR HHKVLIIGGG DGLGLKQVLR WEPEQVTLLD
LDVGLVQLFK SPDTDMPERL SRAMLTLNGN ALNDPRVTVI NDDAFNGVDK LIATGVKYDA
IIVDLPDPSH PDLNKLYSDY FYRKLKELMS SDGALTVQST SPYHAPKAFI SVAKTLALAG
FDVKQYHHNV PSFGEWGWSI ATAGGLDAQH RLAKLTELPI KDDWLTLGLV DGAFEFPANF
YQDAAKIKPN ELGSLQLYHY HLQDWSENQG LNLF
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