| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3442 |
|---|
| Symbol | |
|---|
| ID | 4844635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 4035644 |
|---|
| End bp | 4036642 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640120707 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001051788 |
|---|
| Protein GI | 126175639 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAGC GTTCGTCATC GACTCAGCTT AAATTGCGGC ACTTGAGTTT TAGGTTACTG
CAGGTGTATG TGCAAGTGGT GCGGTTAGGC AATATTTCCG CAGCGGCGAG GGCCTTGCAT
TTAACCCAAC CCACAGTGTC ATTACAGCTT AAAAAGCTGG CCGATGTATT GGGTGAACCG
TTACTTGAGA GTCGTGATGG CCGCATGTTA CCGACCTTGA TTGGCAATGA ACTCTACCGC
GCCGCCTGCG ATACCTTGAG TCGTTTTGAG GATTTCGATG CCTTTATGCA GCAGGCCAAA
GGTGGCAGCG TTGGGCATAT TAATATCGGT ATCGTCACTA CCGCCAAATA CGTGTTACCA
CGGATTTTAG GGGCTTTTTA TCGGCAGTTT CCACAGGTTA AAGTGACCTT AAACATAGGT
AACCGTGCCC ATGTATTAGG TCGATTTGAG CGCCAAGAAG ATGATTTATA CCTGTTTAGT
CATCCTCCTA GTGGCGATAA CGTCTTATCT GCGCGGATCA TTAAAAACCC GCTGCAATTG
ATTGCGCCAA AAGATCATTG GGCGGTGGGC CGTGAGCAAG TGAGTTTTAA CGATCTTAAA
AATGAGCGTT TTATCGTGCG CGAGCCAGGT TCTGCCACCC GCTTGATGTT CGAGTCTTGG
TGCAGCGGTC AAGGCATCAC GCTTAGTGAC ACTATGCAAA TTGAGAGCAA TGAGGCGATA
CGCTTAAGCG TCGCGTCGGG CTTGGGGTTG TCGGTGATTT CGGCGCACAC GCTGCAAGAA
GGGCGCGAAA AACCGGCTAT TTTGCCGGTA ACGGGTTTTC CGCTCGAAAG TAACTGGTAT
CTGGTTGGCC GCAAAGATCG CCGCTTGCCC TATGCCGCCA TGCAGCTGGT GGACTTTATG
GCGGCGCATT TGGCCGAGTG TATCGAGCCC GAATGGGTTG CCGCCGATAT CAGTGAATTG
GCTATGCACT TTAATCATGC GCCGCAAACT CGATCTTAG
|
|---|
| Protein sequence | MDKRSSSTQL KLRHLSFRLL QVYVQVVRLG NISAAARALH LTQPTVSLQL KKLADVLGEP
LLESRDGRML PTLIGNELYR AACDTLSRFE DFDAFMQQAK GGSVGHINIG IVTTAKYVLP
RILGAFYRQF PQVKVTLNIG NRAHVLGRFE RQEDDLYLFS HPPSGDNVLS ARIIKNPLQL
IAPKDHWAVG REQVSFNDLK NERFIVREPG SATRLMFESW CSGQGITLSD TMQIESNEAI
RLSVASGLGL SVISAHTLQE GREKPAILPV TGFPLESNWY LVGRKDRRLP YAAMQLVDFM
AAHLAECIEP EWVAADISEL AMHFNHAPQT RS
|
|---|
| |