| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3431 |
|---|
| Symbol | |
|---|
| ID | 4844624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 4022443 |
|---|
| End bp | 4023123 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640120696 |
|---|
| Product | response regulator receiver/unknown domain-containing protein |
|---|
| Protein accession | YP_001051777 |
|---|
| Protein GI | 126175628 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG4565] Response regulator of citrate/malate metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATACAG TGATCATCGT CGAGGATGAA GTCGAAGTCG CCCATTTGGT TGCGCAATAT
TTGTTCTCGA CCAATCGTTA TAAAGTGATT GGCATGGCGA GCGATATCTG CACGGCGCGG
TCTTTACTGG GCGCTATCAC GCCTGACCTC TTACTGTTAG ACGTGTATTT ACCCGACGGT
AATGGTTTGA ATTTACTGGC AGAATTACGC AGCCAAGGGA TCCGTAGCGA AGTGGTATTG
CTCACTGCGG CCAAAGAAGT GCAGATTTTA GAAAAAGCCA TGCAGTTAGG CGTGTTCGAT
TTTCTGGTAA AACCTGTACT CTTGAGTCGG TTAGACCAAG CTTTGAGTCG ATTCGAGAGT
CGCCAGCTCA AACTTTCTGC AACAGAAGAG CTGACTCAAT CCGTGGTCGA TGCCTTTATG
GAAGTGCCGA TAGGGACGAC CAAGGCTGCT GCTCGTTTGC CAAAGGGGGT CGATCAATTG
ACCCTACAGA AAATTCGCGA AGTGTTTGAT GCTAAGCCGC AAGATAAACT TACGGCGCAA
ATGGTGGGTG AAAAGCTAGG CGTTAGCCGT TCTACTGCGC GGCGTTATTT AGAGTTTTTG
TTGGAATGCA ATGAGCTGGC GGCGGATCAG AGTTATGGCT CCATCGGCCG CCCCGAACGT
TGCTACCACA GAGTGCGCTA G
|
|---|
| Protein sequence | MHTVIIVEDE VEVAHLVAQY LFSTNRYKVI GMASDICTAR SLLGAITPDL LLLDVYLPDG
NGLNLLAELR SQGIRSEVVL LTAAKEVQIL EKAMQLGVFD FLVKPVLLSR LDQALSRFES
RQLKLSATEE LTQSVVDAFM EVPIGTTKAA ARLPKGVDQL TLQKIREVFD AKPQDKLTAQ
MVGEKLGVSR STARRYLEFL LECNELAADQ SYGSIGRPER CYHRVR
|
|---|
| |