Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3390 |
Symbol | |
ID | 4842493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 3970404 |
End bp | 3971294 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640120655 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001051736 |
Protein GI | 126175587 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCTCA AAGTTATTCG CTATTTTATC GAAATCGTCG ATGCCGGAGG CTTTGGTAAA GCCAGCGAAA AAGTCCATCT CACCCAACCT GCGTTATCAA AAGCCGTGCG CCAGTTAGAA CAAGAACTCG ATCTCACCTT GCTTGAGCGC GGTAAACGCG GCACCCAAGT CAAACTCACT CCTGCAGGCG AAGTCGTTTA TCGACACGGT AAAGACCTTC TCGCCGGAAG GCAACGCATG CTAGCCGAAC TCACGGCGCA GCGCAGCTTA ACCGCAGGCG AACTCAATCT GGGATTAGCG CCGCTGGGCA GCGCCGAGAT TTTTGCCCCC ATTATTGCCA AGTATCGCCA GCAATATCCG CAAATAGACA TGCACTTGCT CGTCCGTGGC GGTGTAGAAC AAACTTCGGC GATCCAAAAG GGTGAGATTG AACTGGCCAC AGGGATTATC GATTTTGATG ATGGCTATGA TGGTATTCGG GTGTTTAACG ATCCTATGGT AGTGGTGCTT CCCAAGGAAA ATCCGTTATC CACCCGACAG ATATTGTCGT TTAGCGATCT CAGCGCCGAT CCTCAAGTGA TGTTCGAAAC CGAATACACC CTCTACCAAT TAGTGCTCAA TGCCTGCCGA CACGCCGGAT TTGTCCCTAA AAACATCACC CGCGTTAGCC AAGCCGATTT CGGGATTGCC TTAGTCGCGG CGGGCACTGG GGTGATGGTA TTGCCGCGCT CCATCGCGCG GCGCTACAGT GTACCCGGCG TCGTGAATAT CCCGCTGGCG AGTGACGAGC TGCGCTGGGA GCTATCGCTC TTTTGGCGCA AAGACCAAGT ATTGTCCTTT GCAGCTCAAG CCATGATAGC TTTAGTCGAG AAGCACTTAA CTCATAAGTG A
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Protein sequence | MDLKVIRYFI EIVDAGGFGK ASEKVHLTQP ALSKAVRQLE QELDLTLLER GKRGTQVKLT PAGEVVYRHG KDLLAGRQRM LAELTAQRSL TAGELNLGLA PLGSAEIFAP IIAKYRQQYP QIDMHLLVRG GVEQTSAIQK GEIELATGII DFDDGYDGIR VFNDPMVVVL PKENPLSTRQ ILSFSDLSAD PQVMFETEYT LYQLVLNACR HAGFVPKNIT RVSQADFGIA LVAAGTGVMV LPRSIARRYS VPGVVNIPLA SDELRWELSL FWRKDQVLSF AAQAMIALVE KHLTHK
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