| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3368 |
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| Symbol | metH |
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| ID | 4842207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 3934781 |
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| End bp | 3938482 |
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| Gene Length | 3702 bp |
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| Protein Length | 1233 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640120633 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_001051714 |
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| Protein GI | 126175565 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAGACA TTCGTAAACA GCTTGCTGAG CGCATTCTAA TCTTAGACGG TGCCATGGGC
ACTATGATCC AAGACCACAA GCTCGAAGAA GAGGATTATC GCGGCGAACG CTTTAAAGAT
TGGCACACTG ACGTCAAAGG CAACAACGAT TTATTGGTAT TGTCGCAACC CCACATCATC
AAAAAAATTC ACACCGACTA CTTAAACGCC GGTGCCGACA TCATTGAAAC CAACACCTTT
AATGCTACGA CTATCGCCAT GGCCGACTAT GACATGCAGT CGTTGTCCGC CGAAATTAAC
TTAGCCGGTG CCCGTCTTGC CCGTGAAGCC TGTGATGAAG TGTTTGCTGC CACAGGCATT
CCACGTTACG TCGCTGGTGT GTTAGGCCCC ACTAACCGTA CGTGTTCGAT CAGCCCCGAT
GTGAACGACC CTGGCTATCG CAATGTCAGC TTCGATGAGT TAGTGAGCGC TTACCGAGAA
TCCACTAAGG CGCTGATTGA AGGCGGCGCG GATATCATTA TGGTCGAGAC CATATTTGAT
ACCTTAAACG CCAAGGCCGC ACTGTTTGCG ATTGAATCGG TATTTGATGA CTTATTTGGT
CAGCATTCTA AAGACAGATT ACCGATCATG ATTTCGGGCA CCATTACCGA TGCCTCAGGC
CGCACCCTTA CCGGCCAAAC CACCGAAGCT TTTTATAATT CCCTGCGCCA TATCAAGCCG
TTATCTATCG GTCTTAACTG TGCACTCGGG CCAAAAGAGC TGCGCCCGTA CGTCGAAGAA
TTATCCCGTA TAGCCGAATG TTATGTGTCG GCGCATCCGA ACGCGGGCCT GCCGAACGAG
TTTGGCGGCT ATGATGAAAC CCCAGAGGAC ATGGCGAACG TGATTGAAGA TTGGGCGCGC
GAAGGCATGC TCAATATTAT CGGTGGTTGC TGTGGTAGTA CGCCTGAACA TATCCGCGTT
ATTCGCGAAG CGGTCGACAG ACATAACCCG CGCGTCTTGC CCAATATCCC CGTAGCCTGC
CGCTTAGCCG GTTTGGAACC ACTGACTATC GATGCCCAAT CCTTGTTCGT TAACGTGGGT
GAGCGCACCA ACGTTACAGG TTCGGCCAAG TTTTTAAAGC TGATCAAAGA CGGTAAGTTT
GAGCAAGCCC TCGATGTCGC TCGCGAGCAG GTCGAGAGCG GCGCGCAGAT CATCGACATC
AACATGGACG AAGGCATGCT CGATGGCGCC GAGATCATGC ACAAGTTTTT AAACTTGATT
GCCTCTGAGC CCGACATCAG CCGCGTGCCA ATTATGATCG ACTCCTCTAA GTGGGAAGTC
ATCGAAGCTG GTCTTAAATG TATTCAAGGC AAAGGCATAG TTAACTCGAT TTCCCTTAAA
GAAGGCGAAG CCAAGTTTAT TGAGCAAGCC ACCTTAGTCA AACGCTACGG CGCGGCGGCC
ATTATCATGG CATTCGACGA ACAAGGTCAG GCCGATACTA AGGCGCGTAA AATCGAAATC
TGTACCCGCG CTTATCGGGT GCTGGTTGAT AAGGTCGGCT TTCCGCCAGA AGACATCATC
TTCGACCCGA ACATTTTTGC CATCGCCACG GGTATCGATG AACACGACAA CTATGCCGTC
GATTTTATTG ATGCCATTAA AGCGATTAAA GCCACCCTGC CCCACGCGAT GATTTCGGGC
GGCGTGTCGA ATGTGTCGTT CTCGTTTCGC GGTAACAACC CAGTGCGCGA GGCGATTCAC
GCGGTATTCC TGTACCACGC CATCAAAGTC GGCATGGACA TGGGCATTGT CAACGCGGGT
CAGTTAGCCA TTTACGACGA TATCGATCCT GAGCTTAAAG TACGGGTCGA AAACGTGGTG
CTTAACTTGC CCTGCCCAGT CGAAGGCTCA AGCAATACCG AGCAGTTACT TGAAATCGCG
GAGAAATTCC GCGGTGATGG CGCACAGGTG GGTAAAAAAG AAGATTTAGA ATGGCGCAGC
TGGCCGGTGA GCCAACGCTT ATCCCATGCG CTCGTCAAAG GCATTACCGA ATTTATTGAT
GAAGATACCG AAGCCGCTCG CCAAGAAGCG AAACGTCCGC TGGATGTGAT TGAAGGCGCC
TTGATGGACG GCATGAACGT AGTCGGCGAC TTGTTCGGCT CGGGCAAGAT GTTCCTGCCG
CAGGTGGTAA AATCGGCGCG AGTAATGAAA AAAGCCGTGG CTTACTTAAA CCCCTATATC
GAGCTGGAAA AGGTCGAAGG CCAATCTAAC GGCAAGATCT TGATGGTGAC GGTAAAAGGT
GACGTGCACG ATATTGGCAA GAATATCGTC GGCGTGGTGC TCGCCTGTAA CGGTTTTGAG
GTATTCGATT TAGGTGTGAT GGTGTCAGTG GAGCGAATTC TCGACGCCGT GAAAGAACAC
AATATCGATA TCATCGGCAT GTCGGGCCTC ATCACGCCGA GTCTGGACGA GATGGTGCAT
AACGTGAAAA CCTTCCACCG CGAAGGCTTA ACCATTCCGG CGATTATCGG CGGCGCCACT
TGCTCGAAAA TCCACACAGC GGTGAAGATT GCGCCCCATT ATCCCCATGG CGCGATTTAT
ATCGCCGATG CGTCCCGCGC CGTGCCTATG GTGAGTAAGC TCATCAACAA CGAGACTCGC
CAAGCGACCA TAGACGAAAC CTATGCCGAA TACGACGACA TGCGCACTAA GCGTTTATCC
CAAGCCAAGC GCAAAGAGAT AGTGTCACTC GAAGCGGCGC GTGAAAACCG CTGCCAACAC
GATTGGGCCA ACTACACCCC GTTCACGCCA AACGTGCTCG GTCGCCAAGT ATTTAATAAT
TATCCATTAG AAGACTTAGT CGAGCGTATC GACTGGACAC CGTTTTTCCG CTCGTGGGAA
CTGCACGGCC ATTACCCTGA AATCCTCACC GATAAAGTGG TCGGTGAAGA AGCGCAAAAG
CTGTTCGCCG ATGGTCAGGC CATGCTCAAA CAAATTATCG AAGAAAAGTG GCTCACGGCG
AAAGCAGTTA TCGGCTTATT CCCTGCCAAT ACCGTCAATT ACGACGACAT TGAGCTGTAT
ACCGATGAGT CGCGCACCAC AGTCGAAATG ACCACACATC ACCTGCGGAT GCAGCTTGAG
CGTGTCGGCA ACGACAACTT CTGTCTATCT GACTTTGTTG CACCAAAAGA CTCAGGCGTC
GCCGATTACA TGGGCGGCTT TGCGGTGACT ACAGGCCACG GCATAGACGA ACATGTGGCG
CGTTTTGAAG CCAACCACGA CGACTACAAC GCCATCATGC TCAAATGCTT AGCCGACCGT
TTGGCCGAAG CCTTTGCCGA GCGGATGCAC GAACGGGTAC GTAAAGAGTT TTGGGGTTAT
GCGGCCGACG AGCAGTTAAG TAACGAAGCC TTAATACGCG AGAAATACAA AGGCATACGC
CCCGCACCCG GTTACCCAGC TTGCCCAGAC CACACAGAAA AAGGCTTGTT ATGGGACTTG
CTCAAGCCCG ATGAAACCAT CGACTTGAAC ATCACCGAAA GCTACGCCAT GTTCCCCACA
GCGGCAGTAT CGGGCTGGTA TTTCGCCCAC CCGAAATCGC GCTACTTTGG CGTGAGTAAC
ATCGGCCGCG ATCAAGTGGA AGATTATGCC AAGCGTAAAG GGATGACTGT AGCTGAGACG
GAGAAGTGGC TGGCGCCAGT GTTGGATTAT GACCCTGAAT AG
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| Protein sequence | MADIRKQLAE RILILDGAMG TMIQDHKLEE EDYRGERFKD WHTDVKGNND LLVLSQPHII
KKIHTDYLNA GADIIETNTF NATTIAMADY DMQSLSAEIN LAGARLAREA CDEVFAATGI
PRYVAGVLGP TNRTCSISPD VNDPGYRNVS FDELVSAYRE STKALIEGGA DIIMVETIFD
TLNAKAALFA IESVFDDLFG QHSKDRLPIM ISGTITDASG RTLTGQTTEA FYNSLRHIKP
LSIGLNCALG PKELRPYVEE LSRIAECYVS AHPNAGLPNE FGGYDETPED MANVIEDWAR
EGMLNIIGGC CGSTPEHIRV IREAVDRHNP RVLPNIPVAC RLAGLEPLTI DAQSLFVNVG
ERTNVTGSAK FLKLIKDGKF EQALDVAREQ VESGAQIIDI NMDEGMLDGA EIMHKFLNLI
ASEPDISRVP IMIDSSKWEV IEAGLKCIQG KGIVNSISLK EGEAKFIEQA TLVKRYGAAA
IIMAFDEQGQ ADTKARKIEI CTRAYRVLVD KVGFPPEDII FDPNIFAIAT GIDEHDNYAV
DFIDAIKAIK ATLPHAMISG GVSNVSFSFR GNNPVREAIH AVFLYHAIKV GMDMGIVNAG
QLAIYDDIDP ELKVRVENVV LNLPCPVEGS SNTEQLLEIA EKFRGDGAQV GKKEDLEWRS
WPVSQRLSHA LVKGITEFID EDTEAARQEA KRPLDVIEGA LMDGMNVVGD LFGSGKMFLP
QVVKSARVMK KAVAYLNPYI ELEKVEGQSN GKILMVTVKG DVHDIGKNIV GVVLACNGFE
VFDLGVMVSV ERILDAVKEH NIDIIGMSGL ITPSLDEMVH NVKTFHREGL TIPAIIGGAT
CSKIHTAVKI APHYPHGAIY IADASRAVPM VSKLINNETR QATIDETYAE YDDMRTKRLS
QAKRKEIVSL EAARENRCQH DWANYTPFTP NVLGRQVFNN YPLEDLVERI DWTPFFRSWE
LHGHYPEILT DKVVGEEAQK LFADGQAMLK QIIEEKWLTA KAVIGLFPAN TVNYDDIELY
TDESRTTVEM TTHHLRMQLE RVGNDNFCLS DFVAPKDSGV ADYMGGFAVT TGHGIDEHVA
RFEANHDDYN AIMLKCLADR LAEAFAERMH ERVRKEFWGY AADEQLSNEA LIREKYKGIR
PAPGYPACPD HTEKGLLWDL LKPDETIDLN ITESYAMFPT AAVSGWYFAH PKSRYFGVSN
IGRDQVEDYA KRKGMTVAET EKWLAPVLDY DPE
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