| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3334 |
|---|
| Symbol | |
|---|
| ID | 4845538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 3898799 |
|---|
| End bp | 3899605 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640120600 |
|---|
| Product | curli production assembly/transport component CsgG |
|---|
| Protein accession | YP_001051681 |
|---|
| Protein GI | 126175532 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1462] Uncharacterized protein involved in formation of curli polymers |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGTT TAGTCTTTTT GGGTCTATTG CTGTTAAGCA TGTCGGCCTG TAGCTTGATC
CCAAAACCCG ATTTAAATAT CACGCCTGCC GAGGTTAACC CCTTGAGTGA AGTGATGCGT
GGGCTACAAA CTCAACCTGG CCCTAAGTTT CCTATCCCAG TAGCCGTGTA TTCCTTTCGC
GATCAAACAG GGCAATATAA ACCACAGGCG AACGTGAGTT CTTTTTCGAC TGCGGTGACT
CAGGGCGCAA CTTCGATGTT GATGCAGACC TTGCTCGATT CTAAATGGTT TACCCCAGTA
GAACGTGAAG GGCTACAAAA CCTGCTGACT GAGCGTAAAA TTAGTAATAA ACAGAGCGGT
ACTAAGGGTG ATGATGTGCC CGTATTATCC ACCGCCAGAT TGTTACTTGA AGGTGGCGTC
ATTAGCTATG AGACTAACAC CAGCACAGGC GGTAGCGGTG TCGAATACTA CGGCATTGGC
GCTTCGGAAA TGTACCGTGA AGATCAGGTG ACCATTTATC TGCGCGCCGT CGATGTGCAC
ACAGGTAAAG TGATGATGTC GGTCTCGACC AGCAAACGAG TCTTGTCACA AGAAATGCGC
GCGGGCTTAT TCCGTTACAC CAGTTTAAAT CGCCTGGCCG AGGCCGAAAT TGGTTTTACC
ACCAATGAGC CAGTGCAGTT TTGCGTGTTG CAAGCCATTG AATTAGCTGT CGCTGAGCTG
ATCGATAAGG GCATTAAGCA AGGCTACTGG AGTCCAACTC AAGTTACCCA GCCAGTCGAA
AAAGCGCAGG AGTTGAGTCA GAGTTAG
|
|---|
| Protein sequence | MARLVFLGLL LLSMSACSLI PKPDLNITPA EVNPLSEVMR GLQTQPGPKF PIPVAVYSFR
DQTGQYKPQA NVSSFSTAVT QGATSMLMQT LLDSKWFTPV EREGLQNLLT ERKISNKQSG
TKGDDVPVLS TARLLLEGGV ISYETNTSTG GSGVEYYGIG ASEMYREDQV TIYLRAVDVH
TGKVMMSVST SKRVLSQEMR AGLFRYTSLN RLAEAEIGFT TNEPVQFCVL QAIELAVAEL
IDKGIKQGYW SPTQVTQPVE KAQELSQS
|
|---|
| |