| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3303 |
|---|
| Symbol | |
|---|
| ID | 4841526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 3866757 |
|---|
| End bp | 3867491 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640120571 |
|---|
| Product | pseudouridine synthase |
|---|
| Protein accession | YP_001051652 |
|---|
| Protein GI | 126175503 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCTC CTGCCGATAG CCCTGCCAAA GTTGATACTT TTATTGCGCC GCCTTGCCTC
GGGCAAATAC GTGTGCTCTA TCAAGATAGC GATATTCTGC TGATTGATAA GCCGAGCGGA
TTATTGAGTC TGTCGGGGAA GAATCCGCTC AATCTCGATT CAGTGCATTA TCGCTTAGTG
CAGGATTTTC CGACGGCCAC TTTGCTGCAC AGACTTGATT TTGGCACTTC TGGCATTATG
CTGGTGGCGC TGAATAAAAG CGTGAATGGT TTGCTGACTA AGCAGTTTCA GGCACGCACG
GTCGAGAAGC GTTATACCGC CTTGCTGCAC GGACATATCG CCGCTGACAG CGGGGTGATT
AATCTGCCGA TCGCTAAAGA TGTCGATCAT TTCCCACTAC AAAAGATTTG CCACAGTACA
GGTAAACCTG CGATCAGCGA ATATCGGGTG CTCGAGCGGT TAACCGAGCC TTTCGCCACG
CGGGTCGAGT TTACCCCGGT TTCTGGCCGA ACCCATCAAC TGCGGATCCA CAGTCAGCAA
TTTGGTCACT CGATTCTGGG GTGCGATCTC TATGGTGGCG TGGGGGAATG CAAAGCTGAT
AACGCGGATG CACCTGATCC ACACATAACA GAAGTGGTGA GTAACAGCAG ATTAATGCTG
CATGCGACCC GCTTAGCGTT TGATCATCCG ATCACGGGTG AGCGTATCGA CTGGCTTTGC
GAGTGTCCTT TCTAA
|
|---|
| Protein sequence | MSAPADSPAK VDTFIAPPCL GQIRVLYQDS DILLIDKPSG LLSLSGKNPL NLDSVHYRLV
QDFPTATLLH RLDFGTSGIM LVALNKSVNG LLTKQFQART VEKRYTALLH GHIAADSGVI
NLPIAKDVDH FPLQKICHST GKPAISEYRV LERLTEPFAT RVEFTPVSGR THQLRIHSQQ
FGHSILGCDL YGGVGECKAD NADAPDPHIT EVVSNSRLML HATRLAFDHP ITGERIDWLC
ECPF
|
|---|
| |