| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3302 |
|---|
| Symbol | |
|---|
| ID | 4841525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 3865882 |
|---|
| End bp | 3866655 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640120570 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001051651 |
|---|
| Protein GI | 126175502 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTAG TCACAAGCTT TTTGCTATCA CTTATCTTCT GCGGTGCTTT TCCCCTGCGC
GCACAGCCGC TAAACATCTA TACAGAAGAA TGGTCACCGA TCAGTTTCTC TATCGATGGC
AAACCTGCTG GTTTAGCGGT GCAAGTCGTA GAAGAAATTC AAAAACGCAT CAAGAACCCA
GATCCAATTA AAGTTGTACC TTGGGCTCGC GGCTGGAAAA TGCTGACCGA GCAGCCCAAT
ACTGTGTTGT TCACTATGAC GCGCACCGCA GAAAGGGAAC AGATGTTTAC TATGATAGGA
CCCGTTGCTG TCGGTACGAC CAATTTTTAT GCCTTAAAAA ATAGCGGCAT AAAAATTACC
TCGATAGAAG ATGCTAAAAC GGCGAAGGCG ATTGGTGTCT ATCGTGCCTC AGTGGAGGAG
CGCTTGCTTA CCGAACACGG CTTTACCAAT GTCGCCGCCT CATCAACTCC CTTGTTGAGT
GCGAAACAAT TGATGAAGCA CCGCATCGAC CTTTGGTGTA ATGCTAATCT TACCGCGCCA
AGTATTTTGT CGGATGCGGG CGCCAGTATT GATGATGTAG AGTCCCTCTT CACGATTAGC
GCTAATCATC TCTACATTGC CTTCTCACAA GGCACGCCGA ATGAGGTGAT CGAGCAGTGG
AAAAGCGCCC TAGAAGCGAT AAAAGCGGAT GGCACTTTCG CAACGATTTA CCATACTTGG
CTCCCCAACG ATGCACCGCC AATGCAGACC GAACGTATCG GGCTGGGCAA CTAA
|
|---|
| Protein sequence | MKLVTSFLLS LIFCGAFPLR AQPLNIYTEE WSPISFSIDG KPAGLAVQVV EEIQKRIKNP
DPIKVVPWAR GWKMLTEQPN TVLFTMTRTA EREQMFTMIG PVAVGTTNFY ALKNSGIKIT
SIEDAKTAKA IGVYRASVEE RLLTEHGFTN VAASSTPLLS AKQLMKHRID LWCNANLTAP
SILSDAGASI DDVESLFTIS ANHLYIAFSQ GTPNEVIEQW KSALEAIKAD GTFATIYHTW
LPNDAPPMQT ERIGLGN
|
|---|
| |