Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3293 |
Symbol | |
ID | 4841516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 3855222 |
End bp | 3855884 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640120561 |
Product | ribose-5-phosphate isomerase A |
Protein accession | YP_001051642 |
Protein GI | 126175493 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0120] Ribose 5-phosphate isomerase |
TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.272189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCAAG ATGAAATGAA AAAAGCTGCC GGTTGGGCCG CACTCAAGTA CGTTGAAAGA GACAGTATTG TTGGTGTTGG TACTGGTTCG ACTGTGAATC ACTTTATTGA TGCACTGGCG ACCATGAAAG CTGATATCGA AGGCGCAGTC TCTAGTTCTG AGGCATCAAC TCAGAAAATG AAAGCGCTGG GTATTCCCGT TTATGACTTA AACAGCGTCG ATCGTTTATC TGTCTATGTG GACGGTGCCG ATGAAATCAA CGACCGTATG GATATGATCA AAGGGGGCGG CGCGGCGTTA ACTCGCGAGA AAATTGTTGC GGCTGTGGCT GAAAAATTTA TCTGTATCGT GGATAACACT AAGCAAGTCG ACATCCTAGG GGAATTCCCA CTGCCAGTTG AAGTCATTCC TATGGCGCGC TCTTATGTGG CACGTCAGTT AGTTAAGCTA GGCGGCGATC CTGTGTACCG TGAAGGCGTT GTGACCGATA ACGGCAACGT GATCCTCGAT GTGTACAATC TTAAGATCCT TAATCCAAAA GAATTGGAAA GTCAGATCAA TGAGATAGTC GGTGTCGTCA CTAACGGTCT GTTCGCTAAA CGCGGCGCAG ATGTGTTGTT AGTCGGTACA CCTGATGGCG TAAAAACCTT TACCGCCGAA TAA
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Protein sequence | MTQDEMKKAA GWAALKYVER DSIVGVGTGS TVNHFIDALA TMKADIEGAV SSSEASTQKM KALGIPVYDL NSVDRLSVYV DGADEINDRM DMIKGGGAAL TREKIVAAVA EKFICIVDNT KQVDILGEFP LPVEVIPMAR SYVARQLVKL GGDPVYREGV VTDNGNVILD VYNLKILNPK ELESQINEIV GVVTNGLFAK RGADVLLVGT PDGVKTFTAE
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