| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3232 |
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| Symbol | prfC |
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| ID | 4842571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 3787733 |
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| End bp | 3789313 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640120490 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001051581 |
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| Protein GI | 126175432 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0110977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGGCA ATAAAGTAGA GGTCGATAAA CGTCGCACCT TCGCGATCAT ATCGCACCCC
GACGCGGGTA AAACAACCAT TACCGAAAAA GTGCTGTTAT TCGGAAACGC TTTGCAAAAA
GCAGGAACGG TTAAAGGCAA AAAATCGGGT CAGCATGCTA AGTCTGACTG GATGGAAATG
GAGAAGGACC GTGGTATTTC GATTACTACG TCTGTGATGC AGTTCCCCTA TGGTGGCGCC
CTCGTTAACC TACTCGACAC GCCTGGTCAC GAAGACTTCT CTGAAGATAC CTATCGTACA
CTGACCGCTG TTGACTCTTG TCTGATGGTC ATCGACTCTG CTAAAGGTGT TGAAGAGCGT
ACTATTAAGT TGATGGAAGT GACACGTCTG CGCGATACGC CGATCGTGAC TTTCATGAAC
AAACTCGACC GTGATATCCG TGATCCTATC GATCTGATGG ATGAAGTCGA AAGCGTGCTG
AATATTGCCT GTGCACCTAT TACTTGGCCT ATTGGCAGCG GTAAAGAATT CAAAGGGATT
TACCATATAC TGCGTGATGA AGTGGTCTTG TATCAAGGCG GTATGGGACA CACAATTCAA
GAGCGTCGTG TAATTAAAGG CATTAATAAT CCTGATCTTG AGAAAGCGAT TGGCAGTTAC
GCTGCTGATT TGCGCGATGA GATGGAATTA GTGCGCGGCG CGTCGCATGA ATTTGACCAT
GCAGCTTTCT TGAAAGGCGA GTTGACGCCA GTGTTCTTCG GTACAGCGTT AGGTAACTTT
GGTGTGGACC ATATTCTTGA CGGCATCGTC GAGTGGGCGC CTAAGCCATT ACCGCGCGAA
AGCGATACAC GCGTTATTAT GCCTGATGAA GAAAAATTCA CCGGTTTCGT GTTCAAGATC
CAAGCTAACA TGGATCCAAA ACACCGTGAC CGTGTCGCCT TTATGCGTGT GTGTTCTGGC
CGTTACGAGC AAGGCATGAA AATGCACCAT GTGCGTATTG GTAAAGATGT TAACGTTAGC
GATGCATTGA CCTTTATGGC GGGCGATCGT GAGCGTGCCG AGGAAGCTTA CCCTGGTGAT
ATCATCGGCT TGCATAACCA TGGCACTATC CGTATTGGCG ATACTTTTAC CCAAGGCGAA
AAATTCCGTT TCACTGGTGT GCCTAACTTC GCCCCTGAAA TGTTCCGCCG TATTCGTCTG
CGCGATCCGC TTAAGCAAAA GCAGCTGTTA AAAGGCTTAG TACAGTTGTC TGAAGAAGGC
GCAGTGCAAG TATTTCGCCC AATCGATACT AACGATTTAA TTGTTGGCGC CGTGGGTGTG
CTACAGTTTG AAGTGGTTGT TGGTCGTCTT AAGAGCGAAT ATAACGTTGA AGCCATTTAC
GAAGGTATTA GCGTTTCGAC CGCTCGCTGG GTTTATTGTA AGGATGAGCG TAAGCTTGAA
GAGTTCCGCC GCAAGTGTAG CCAAAACTTA GCACTCGATG GTGGTGACAA CTTAACCTAT
ATTGCGCCAA CTATGGTCAA CCTGAATCTT TCGATGGAAA GGTATCCTGA TATTGAGTTT
GCAAAAACTC GCGAGCACTA A
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| Protein sequence | MSGNKVEVDK RRTFAIISHP DAGKTTITEK VLLFGNALQK AGTVKGKKSG QHAKSDWMEM
EKDRGISITT SVMQFPYGGA LVNLLDTPGH EDFSEDTYRT LTAVDSCLMV IDSAKGVEER
TIKLMEVTRL RDTPIVTFMN KLDRDIRDPI DLMDEVESVL NIACAPITWP IGSGKEFKGI
YHILRDEVVL YQGGMGHTIQ ERRVIKGINN PDLEKAIGSY AADLRDEMEL VRGASHEFDH
AAFLKGELTP VFFGTALGNF GVDHILDGIV EWAPKPLPRE SDTRVIMPDE EKFTGFVFKI
QANMDPKHRD RVAFMRVCSG RYEQGMKMHH VRIGKDVNVS DALTFMAGDR ERAEEAYPGD
IIGLHNHGTI RIGDTFTQGE KFRFTGVPNF APEMFRRIRL RDPLKQKQLL KGLVQLSEEG
AVQVFRPIDT NDLIVGAVGV LQFEVVVGRL KSEYNVEAIY EGISVSTARW VYCKDERKLE
EFRRKCSQNL ALDGGDNLTY IAPTMVNLNL SMERYPDIEF AKTREH
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