| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3226 |
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| Symbol | deoA |
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| ID | 4842565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 3781262 |
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| End bp | 3782593 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640120484 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_001051575 |
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| Protein GI | 126175426 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02643] thymidine phosphorylase
[TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.547221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTCTAG CTCAAGAGAT TATTCGTAAA AAACGTAATG GTTTAGCGCT CTGTTCCGAA
GAAATACAGT TCTTTGTACA AGGTATCACC ACCAACTCTG TATCTGAAGG TCAGATCGCC
GCATTAGGTA TGGCGGTGTA TTTTAATGAC ATGAATATGG ATGAAAGAAT CGCTTTAACG
ACAGCGATGC GAGATTCAGG CACTGTGCTT AATTGGCAAT CATTGGAACT CAACGGTCCT
GTCATCGACA AACACAGCAC TGGTGGTGTC GGCGATGTGA TTAGTCTCAT GCTTGGCCCT
ATGGCTGCGG CTTGTGGCGG TTATGTGCCT ATGATTTCTG GGCGCGGCCT AGGTCATACT
GGCGGTACAC TCGATAAGTT TGATGCCATT CCGGGTTACC AAACTGAGCC TTCAAGTGAA
TTGTTCCGCA AAGTGGTTAA AGAAGTCGGG GTGGCGATTA TTGGCCAAAC GGGCGATCTC
GTCCCTGCCG ATAAACGCTT CTATTCTATT CGCGATAATA CCGCTACCGT TGAATCCATT
TCCCTCATCA CAGCGTCGAT TCTGTCTAAG AAATTAGCCT GTAATTTAGA TGCGTTGGCG
ATGGACGTAA AAGTTGGTAG CGGCGCTTTC ATGCCAACCT ATGAGGCATC GGAAGAATTA
GCTCGCAGTA TCGCCGCCGT TGCAAATGGC GCGGGTACTA AAACGACGGC TTTACTTACC
GATATGAATC AAGTGCTTGC ATCTTGTGCC GGTAACGCGG TTGAAGTGAA AGAAGCCATA
GACTTTTTAA CGGGTGCTTA CCGTAACCCG CGTTTATATG AAGTCACTAT GGGTCTTTGT
GCTGAGATGC TGCTGCTTGG CGGTCTTGCA AGCAATGAAG CCGATGCTCG CGCTAAACTG
AATCGTGTAC TCGACAATGG TCGCGCCGCA GAGCTCTTTG GCAAGATGGT GTCGGGTCTT
GGTGGTCCAG CCGATTTTGT TGAAAACTAC AGTAAATACC TGCCGCAGTC ACAAATTATT
CGTCCGGTTT TTGCCGATAT GCAAGGTTAT GCCTACAGCA TGGATACCCG TGAGTTAGGT
TTAGCGGTTG TGACCTTAGG TGGCGGCCGT CGTAAGCCCG GCGATGCACT AGACTATAGT
GTTGGCTTAA CCCAAGTGTG TGCCCTAGGC GATAAAGTGG ATTCATCGAC GCCAATTGCG
GTTATCCATG CACAGTCTGA AGCCGCGTTC GCAGAAGCTG AACTTGCGGT GAAAAAAGCG
ATTCACATTG GTGAAACCGC TCCAGAAAAA ACACCTGAGA TCTATGCCTA TATTCGTGCA
TCGGATCTTT AA
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| Protein sequence | MFLAQEIIRK KRNGLALCSE EIQFFVQGIT TNSVSEGQIA ALGMAVYFND MNMDERIALT
TAMRDSGTVL NWQSLELNGP VIDKHSTGGV GDVISLMLGP MAAACGGYVP MISGRGLGHT
GGTLDKFDAI PGYQTEPSSE LFRKVVKEVG VAIIGQTGDL VPADKRFYSI RDNTATVESI
SLITASILSK KLACNLDALA MDVKVGSGAF MPTYEASEEL ARSIAAVANG AGTKTTALLT
DMNQVLASCA GNAVEVKEAI DFLTGAYRNP RLYEVTMGLC AEMLLLGGLA SNEADARAKL
NRVLDNGRAA ELFGKMVSGL GGPADFVENY SKYLPQSQII RPVFADMQGY AYSMDTRELG
LAVVTLGGGR RKPGDALDYS VGLTQVCALG DKVDSSTPIA VIHAQSEAAF AEAELAVKKA
IHIGETAPEK TPEIYAYIRA SDL
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