Gene Sbal_3172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_3172 
Symbol 
ID4843072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp3714821 
End bp3715984 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content46% 
IMG OID640120431 
ProductBcr/CflA subfamily drug resistance transporter 
Protein accessionYP_001051522 
Protein GI126175373 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATAA AACCACCATT AGGGCTCGTT GTGCTGCTAA TGATGTTTCC GCAAATTATG 
GAAACCATTT ATAGCCCTGC TTTGCCTAAT ATTGCAGAAA ACTTTGCGGT GTCGGTTGCC
GCTGCATCGC AAACCTTATC TGTGTACTTT ATGGCCTTTG CCATCGGCGT ATTTTGCTGG
GGCCGCTTAG CCGACATTAT TGGTCGCCGT AAAGCTATGC TCGCGGGATT AGTCTGTTAT
GCCATTGGCT CAGCGTTAGC CTTGATGGTT AGCGACTTTA GCCTGTTGTT GATGGCCCGC
GTATTGTCGG CCTTTGGCGC GGCAGTGGGG TCTGTGATTA CTCAAACTAT GATGCGTGAC
AGTTATAGCG GAGAGGAATT AGCGAGAGTC TTTTCTGTGA TGGGGATGTC ACTTGGAATA
AGCCCAGTTA TCGGATTGCT ATTGGGCAGT GTTCTCAGTG CGTATTGGGG TTATAAAGGT
GTGTTTGTCG CACTCATGGT CTCTGCAATC GTATTATTAT TTTTGTCGGT AAAATCTTTA
CCCGAAACCA AACCCGCACA TACTCAGAAA ATCGCGATAG GCGAGTTAGC GATTAAGATG
CTTAGTGACA GCGGGATTAT TAAGAACACC TTGTTGGTGG CGGCGTTTAA TCTGATGTGG
TTTAGCTACT TTTCACTGGC GCCATTTATG TTTGAGGCGC AAGGGTTATC GACGCTTGCC
TTTGGTACCA GTGGCTTACT GTTAGGCTTT GGTACATTCC TTGGCAGTTA TGTTAATAAA
ATAATGCTGG GTCGAGGCCA CACTGGTGCA CGACTGGTTC GCTTAGCCAG TGCTATTGCA
CTTGTCGGTG GATTGGGGAT TTGGCTGATC CAATCTACCT TTATAGGGCT GAATAATGTT
TACTTTTTAG CGCCTATGCT ATTGATTGTG ATTGCTTACG GTATCGCGAT TCCGAACATA
CTCAGCTCGG CTTTGGCAAA CTACCGCATC TATGCGGGCT CTGCTGGTGC ACTCTTCGGA
CTGTTTTATT ACATTCTGTT GGGACTGGGT TTAGGCGGCA CGGGAATCGT TCACCATTTA
GGTATGGTGA TTACGTTAAG TGCACTGCTT TGTGTTGGCT TAGGTTTACA TTTAGGCTTA
GCCAATAAAG TAAAAAATGC TTAA
 
Protein sequence
MNIKPPLGLV VLLMMFPQIM ETIYSPALPN IAENFAVSVA AASQTLSVYF MAFAIGVFCW 
GRLADIIGRR KAMLAGLVCY AIGSALALMV SDFSLLLMAR VLSAFGAAVG SVITQTMMRD
SYSGEELARV FSVMGMSLGI SPVIGLLLGS VLSAYWGYKG VFVALMVSAI VLLFLSVKSL
PETKPAHTQK IAIGELAIKM LSDSGIIKNT LLVAAFNLMW FSYFSLAPFM FEAQGLSTLA
FGTSGLLLGF GTFLGSYVNK IMLGRGHTGA RLVRLASAIA LVGGLGIWLI QSTFIGLNNV
YFLAPMLLIV IAYGIAIPNI LSSALANYRI YAGSAGALFG LFYYILLGLG LGGTGIVHHL
GMVITLSALL CVGLGLHLGL ANKVKNA