Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3171 |
Symbol | |
ID | 4843071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 3711601 |
End bp | 3714744 |
Gene Length | 3144 bp |
Protein Length | 1047 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640120430 |
Product | acriflavin resistance protein |
Protein accession | YP_001051521 |
Protein GI | 126175372 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0148776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGGTTAT CCGATGTTTC GGTTAAACGC CCTGTCGTTG CCATCGTTTT AAGCTTACTG CTGTGCGTAT TCGGCATAGT CTCCTTCTCT AAATTGTCGA TACGGGAAAT GCCCGACGTC GAAAGCCCTG TGGTCACCAT TAGCACCAGT TACTCGGGTG CGTCGGCGGC TATTATGGAA AGCCAGATCA CTAAGACCCT AGAAGATGAA CTGACGGGGA TCAGTGGTAT CGACGAAATC ACATCGACCA CCCGTAATGG TAGCTCGCGT ATCACAGTGA AGTTCCTCCT CGGGTGGAAC TTAACCGAAG GCGTGAGTGA TGTGCGTGAT GCGGTGGCCC GTGCCCAGCG CAGGCTGCCT GAAGATGCGA AAGATCCTGT CGTCTCCAAA GACAACGGTT CGGGCGAGCC CTCCGTCTAT GTGAATTTAA GTTCGAGTGT GATGGACCGC ACTCAATTAA CGGATTACGC CCAGCGCGTG TTAGAGGACA GATTTAGCCT TATCAGCGGC GTGAGCTCCA TCAGTATTTC CGGCGGCTTG TACAAGGTCA TGTACGTCAA GCTCAGACCC GAGCAAATGG CGGGCCGCAA TGTAACAGTC ACCGACATAA CGAACGCGCT GCGCAAAGAA AACATCGAAA CACCCGGCGG CCAAGTGCGA AACGACACCA CAGTGATGTC GGTACGCACC AAACGCTTGT ACTACACGCC AAAGGATTTT GACTACCTTG TGGTGCGTAC CGCCAGCGAT GGCACGCCTA TCTACTTAAA AGATGTGGCC GATGTGGCTG TCGGCGCACA AAACGAAAAC TCGACCTTCA AAAGCGATGG TATCGTTAAC ATCAGTTTAG GCATTATTGC CCAGTCCGAT GCTAACCCAT TGCTCGTAGC CAAAGAAGTG CACCAAGAAG TCGACCGCGT ACAAGACTTC CTGCCCGAAG GCACTAGCCT AGTGGTCGAC TTCGACTCTA CCGTATTTAT CGACCGCTCG ATTAACGAGG TGTATAGCAC CCTTTATGTC ACGGGCGCCT TAGTGGTACT CGTGCTGTAT ATCTTCATCG GACAAGCGCG GGCGACACTC ATCCCTGCGG TAACGGTTCC GGTATCGTTA ATCTCGGCAT TTATCGCCGC TAACATGCTA GGTTATTCGA TTAACCTACT GACATTAATG GCGTTAATCC TCTCCATCGG TCTAGTGGTC GATGATGCGA TTGTGGTGGT CGAGAACATT TTCCACCATA TCGAAAAAGG CGAAGAGCCG TTACTCGCCG CCTATAAAGG CACCCGCGAA GTAGGCTTTG CCGTTGTCGC CACCACGGCG GTATTAGTCA TGGTATTCCT GCCGATTTCC TTTATGGAGG GCATGGTTGG ACTCTTGTTT ACCGAGTTCT CCGTGATGTT GGCGGTGTCG GTACTGTTTT CCTCCTTAGT AGCACTGACA CTTACGCCCG TGCTGAGCAG CAAGTTACTT AAAGCCAACG TCAAACCGAA TCGCTTTAAT CGTTGGGTCG ATCGCGGTTT TGCCCGCATG GAAAGCGTCT ATCGCGTCGC CGTTACTCGG GCGATTAAAC TTCGTCTCCT CGCGCCCTTA GTTATTCTCG CCTGTATCGG CGGCAGTGCT TGGTTAATGC AACAAGTGCC GTCACAGCTG GCGCCGCAGG AAGACCGCGG TGTGTTGTTC GCCTTTGTTA AAGGCGCCGA AGGCACCAGT TATAACCGTA TGACAGCCAA CATGGACATA GTCGAAGACA GACTCATGCC CTTGCTAGGT CAAGGTGTGC TGCGATCCTT CAGCGTGCAA GCCCCCGCGT TTGGTGGCCG TGCGGGCGAT CAAACGGGCT TTGTGATCAT GCAGCTTGAA GATTGGGGCA CACGCACCGA ATCCGCACAG CAAGCGCTTG GGATTATTAG CAAAGCATTG AAGGACATTC CCGATGTGAT GGTTCGCCCT ATGATGCCAG GCTTTAGGGG CCAATCGAGC GAACCGGTGC AATTTGTGCT TGGTGGTTCG GACTATGCCG AACTCTTTAA GTGGGCGCAG GTGCTCAAAG AAGAAGCCAA TGCCAGCCCT ATGATGGAAG GCGCCGATTT AGACTACGCC GAAACCACGC CTGAGCTTAT CGTTACTGTT GATAAAGAAC GCGCTGCGGA GCTTGGGATC AGTGTCGATG ACGTCTCGCA AACCTTAGAA GTGATGCTCG GCGGTCGCAC CGAAACCACC TATGTGGATC GCGGCGAAGA GTACGATGTG TACTTGCGCG GTGATGAAAA CAGTTTTAAC AACGTTGGCG ATCTTAGCCA AATCTACATG CGTTCCGGTA AAGGCGAATT AGTGACGCTT GATACAGTGA CCCATATCGA AGAAATTGCT TCGGCCCAAA GATTAAGTCA CACAAATAAG CAAAAATCGA TCACCCTCAA GGCTAACGTC AGTGAAGGCT ACACCTTAGG TGAAGGCTTA AAGTTTCTTG ATGCTAAAGC CATTGAATTA TTACCTAAAG ATATTTCCAT TGGTTACACC GGCGAATCCA AAGACTTTAA GGAAAACCAA AGCAGTATCT TCATCGTATT TGGTTTGGCC TTACTGGTCG CTTACTTAGT GTTAGCAGCG CAGTTTGAAA GTTTTATCAA CCCGTTAGTG GTGATGTTTA CTGTGCCTAT GGGCGTGTTT GGTGGTTTCT TAGGTCTACT ACTCACCAGT CAAGGGATCA ACATCTACAG CCAGATAGGC ATGATCATGT TGATTGGTAT GGTGACCAAA AACGGTATCC TTATCGTTGA GTTTGCTAAC CAATTGCGTG ACCGCGGCTT TGAACTCGAT AAAGCCATTA TCGACGCTTC ATCCCGTCGT TTGCGGCCAA TCCTAATGAC AGCCTTCACC ACTTTAGTTG GCGCTGTACC GTTAATTTTC TCGACGGGCG CAGGTTCAGA AAGTCGTATC GCTGTGGGTA CTGTAGTGTT CTTCGGTATG GCATTCGCCA CCTTTGTGAC ACTACTCGTC ATCCCTGCCA TGTATCGATT AATCTCGGCA GCGACCCATT CACCGGGATA TGTTGAAGCT AAGCTTGAAG CGGCAATTAA AGCACAAGAG TTAGCGGCCC AAGAGGCGGC GGCAAAGCAG CAGGAACTCA CGCCTAAAGC CTAA
|
Protein sequence | MWLSDVSVKR PVVAIVLSLL LCVFGIVSFS KLSIREMPDV ESPVVTISTS YSGASAAIME SQITKTLEDE LTGISGIDEI TSTTRNGSSR ITVKFLLGWN LTEGVSDVRD AVARAQRRLP EDAKDPVVSK DNGSGEPSVY VNLSSSVMDR TQLTDYAQRV LEDRFSLISG VSSISISGGL YKVMYVKLRP EQMAGRNVTV TDITNALRKE NIETPGGQVR NDTTVMSVRT KRLYYTPKDF DYLVVRTASD GTPIYLKDVA DVAVGAQNEN STFKSDGIVN ISLGIIAQSD ANPLLVAKEV HQEVDRVQDF LPEGTSLVVD FDSTVFIDRS INEVYSTLYV TGALVVLVLY IFIGQARATL IPAVTVPVSL ISAFIAANML GYSINLLTLM ALILSIGLVV DDAIVVVENI FHHIEKGEEP LLAAYKGTRE VGFAVVATTA VLVMVFLPIS FMEGMVGLLF TEFSVMLAVS VLFSSLVALT LTPVLSSKLL KANVKPNRFN RWVDRGFARM ESVYRVAVTR AIKLRLLAPL VILACIGGSA WLMQQVPSQL APQEDRGVLF AFVKGAEGTS YNRMTANMDI VEDRLMPLLG QGVLRSFSVQ APAFGGRAGD QTGFVIMQLE DWGTRTESAQ QALGIISKAL KDIPDVMVRP MMPGFRGQSS EPVQFVLGGS DYAELFKWAQ VLKEEANASP MMEGADLDYA ETTPELIVTV DKERAAELGI SVDDVSQTLE VMLGGRTETT YVDRGEEYDV YLRGDENSFN NVGDLSQIYM RSGKGELVTL DTVTHIEEIA SAQRLSHTNK QKSITLKANV SEGYTLGEGL KFLDAKAIEL LPKDISIGYT GESKDFKENQ SSIFIVFGLA LLVAYLVLAA QFESFINPLV VMFTVPMGVF GGFLGLLLTS QGINIYSQIG MIMLIGMVTK NGILIVEFAN QLRDRGFELD KAIIDASSRR LRPILMTAFT TLVGAVPLIF STGAGSESRI AVGTVVFFGM AFATFVTLLV IPAMYRLISA ATHSPGYVEA KLEAAIKAQE LAAQEAAAKQ QELTPKA
|
| |