| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3163 |
|---|
| Symbol | |
|---|
| ID | 4845417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 3702226 |
|---|
| End bp | 3703893 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640120422 |
|---|
| Product | putative ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_001051513 |
|---|
| Protein GI | 126175364 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAGT TTGTTTACAG CATGCTGCGG GTGGGTAAAA TTGTTCCGCC TAAGAAGCAG
ATCCTTAAAG ATATTTCTTT AAGCTTTTTC CCCGGCGCCA AAATTGGCGT ACTCGGCCTC
AACGGTTCAG GTAAGTCGAC ACTACTGCGC ATTATGGCGG GTATCGACAC CGAAATTGAA
GGTGAAGCGC GCCCAATGCC GGGATTGAAA ATCGGTTACC TGCCGCAGGA ACCTAAACTC
GATCCGAATC AAACCGTGCG TGAAGCGATT GAAGAAGCGG TTGCAGAGGC AAAAAATGCC
CTGACTCGCC TCGATGCCGT TTATGCTGCC TACGCCGAGC CGGATGCCGA TTTCGACGCC
CTTGCGAAAG AGCAAGGCGA ACTCGAAGCG ATTATCCAAG CCCAAGATGC CCATAACTTA
GAGTACGTCC TTGAGCGCGC CGCTAACGCC CTGCGTCTGC CGGATTGGGA TGAAAAAATT
GAAGTGTTAT CCGGTGGTGA ACGTCGCCGC GTAGCGATTT GTCGTTTGCT GCTTGAAAAG
CCAGAAATGC TGTTACTGGA CGAACCAACC AACCACTTGG ATGCTGAATC TGTGGCGTGG
CTTGAGCACT TTTTGCAGGA ATATGCCGGT ACTGTGGTCG CGATTACCCA TGACAGATAC
TTCCTCGACA ATGCCGCTGG CTGGATTTTA GAACTCGACC GCGGTGAAGG TATTCCGTGG
GAAGGTAACT ATTCTTCATG GCTTGAGCAG AAAGACGCCC GTCTGAAACA AGAATCTGCC
ACCGAAAGTG CTCGCCAAAA AACCATTGCC AAGGAATTGG AATGGGTACG CCAAGGTCCG
AAAGGCCGTC AGTCTAAGGG TAAAGCCCGT ATGGCACGCT TTGAAGAACT GAACACTAAC
GATTACCAAA AACGTAACGA AACCAACGAG CTGTTTATTC CGCCCGGACC ACGTTTAGGT
GACAAGGTTA TTGAAGTAAA TAACCTGACC AAGTCTTACG GTGACCGCGT ACTCATCGAC
AACCTGTCGT TCTCTGTGCC TAAGGGCGCG ATCGTCGGTA TTATCGGTGC CAACGGCGCG
GGTAAATCGA CCCTGTTCCG CATGTTATCC GGCGCTGAAA CACCAGACAG CGGCACGATT
GAGCTGGGTG ATACTGTGCA ATTAGCATCG GTTGAGCAGT TCCGCGATTC GATGAATGAT
AAGAACACCA TTTGGGAAGA AATCTCCGGT GGTCAAGACA TCATGCGTAT CAACAACATG
GAAATCCCGA GCCGCGCCTA TGTGGGCCGC TTCAACTTCC GTGGTGGCGA TCAGCAAAAA
GTTATCGGCA CCTTGTCTGG TGGTGAGCGT AACCGGGTGC ATTTAGCCAA ACTGCTGCAA
GCGGGCGGTA ACGTCTTATT ACTCGATGAA CCCACCAACG ACTTAGACGT TGAAACCCTG
CGTGCACTGG AAGAAGCGAT TCTGGAATTC CCAGGTTGCG CTATGGTGAT TTCGCATGAC
CGTTGGTTCC TCGACCGTAT AGCGACCCAC ATTCTGGATT ACCGTGACGA AGGCCAAGTG
AACTTCTACG AAGGTAACTA CACAGAATAC TCGGCATGGT TGAAAAACAC CTATGGCGCC
GATGTGGTTG AGCCACACCG CTTGAAATAC AAGCGCATGA TTAAGTAG
|
|---|
| Protein sequence | MAQFVYSMLR VGKIVPPKKQ ILKDISLSFF PGAKIGVLGL NGSGKSTLLR IMAGIDTEIE
GEARPMPGLK IGYLPQEPKL DPNQTVREAI EEAVAEAKNA LTRLDAVYAA YAEPDADFDA
LAKEQGELEA IIQAQDAHNL EYVLERAANA LRLPDWDEKI EVLSGGERRR VAICRLLLEK
PEMLLLDEPT NHLDAESVAW LEHFLQEYAG TVVAITHDRY FLDNAAGWIL ELDRGEGIPW
EGNYSSWLEQ KDARLKQESA TESARQKTIA KELEWVRQGP KGRQSKGKAR MARFEELNTN
DYQKRNETNE LFIPPGPRLG DKVIEVNNLT KSYGDRVLID NLSFSVPKGA IVGIIGANGA
GKSTLFRMLS GAETPDSGTI ELGDTVQLAS VEQFRDSMND KNTIWEEISG GQDIMRINNM
EIPSRAYVGR FNFRGGDQQK VIGTLSGGER NRVHLAKLLQ AGGNVLLLDE PTNDLDVETL
RALEEAILEF PGCAMVISHD RWFLDRIATH ILDYRDEGQV NFYEGNYTEY SAWLKNTYGA
DVVEPHRLKY KRMIK
|
|---|
| |