| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3125 |
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| Symbol | ispD |
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| ID | 4845716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 3660095 |
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| End bp | 3660886 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640120384 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_001051475 |
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| Protein GI | 126175326 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.520592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGAGC TAGGACATTT AGATCTTGGA TTAAGCGAAC AATCCAATCC AGGCAGTCAA
TCTGAGCCGG TAATGCAAAC TGAATTGCAG CGCCAAGCTG AGCATATCAC TCAAGCTGTG
GTGGCTATTG TTCCCGCTGC GGGCATTGGT AGCCGCATGG GCGCCGACAG ACCTAAACAA
TATCTTGAGG TTTGCGGCCA GAGTATTCTC GGCCATACTT TAGATAAGCT GTTGTCTCAC
CCGCACATTT CCCACGTCAT CGTCGCCTTA CATCCGAATG ATAATATCTT CAATACCCTG
CCACAGGCCG CGCATCCTAA ATTGACCACA GTATTAGGCG GCGGTGAGCG CGCAGATTCT
GTGTTGGCGG CGCTGCAAAT TGCGCCTGAG CACAGTTGGG CCTTAGTGCA TGATGCGGCA
AGACCTTGTT TAACCGCGAC GGATATCGAC AAGTTACTCG CATCCAGAGT GCAATTTCCC
CAAGGCGCGA TTTTGGCCAT GCCAGTGTGC GATACCATGA AGCGCGCCAA TAAACAGGGC
GAAATCAGCG CTACTGTGTG CCGCGATAAT TTATGGCATG CATTAACGCC GCAGTTATTT
CAGGCAGCGC AACTAAAAGA TTACCTCAAT GCCGCTCTGG CGGCAGGTGT GGTCGTGACA
GATGAGGCTT CGGCGATGGA ATGGGCGGGC ATTTCACCTG GACTCGTTTC GGGCCGTGCT
GACAATATAA AAGTGACGCA TCCCGATGAT TTGGGATTGG CCGAATTGTT TTTAATGCGT
GCCGCAAAAT AG
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| Protein sequence | MSELGHLDLG LSEQSNPGSQ SEPVMQTELQ RQAEHITQAV VAIVPAAGIG SRMGADRPKQ
YLEVCGQSIL GHTLDKLLSH PHISHVIVAL HPNDNIFNTL PQAAHPKLTT VLGGGERADS
VLAALQIAPE HSWALVHDAA RPCLTATDID KLLASRVQFP QGAILAMPVC DTMKRANKQG
EISATVCRDN LWHALTPQLF QAAQLKDYLN AALAAGVVVT DEASAMEWAG ISPGLVSGRA
DNIKVTHPDD LGLAELFLMR AAK
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