| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3118 |
|---|
| Symbol | |
|---|
| ID | 4845709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 3652193 |
|---|
| End bp | 3654763 |
|---|
| Gene Length | 2571 bp |
|---|
| Protein Length | 856 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640120377 |
|---|
| Product | DNA mismatch repair protein MutS |
|---|
| Protein accession | YP_001051468 |
|---|
| Protein GI | 126175319 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
|---|
| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTAA TTGATACCGA TGATTTAGAA AAACATACTC CTATGATGCG TCAGTACTTG
ACCATGAAAG CAGAACATCA CGACATGTTA CTGTTTTATC GCATGGGTGA CTTCTACGAG
TTGTTTTATG ACGATGCTAA ACGTGCTTCT GAGCTGTTAG GCATTTCACT CACAGCACGC
GGTAAAAGTG GTGGCGATCC TATCCCCATG GCGGGACTGC CTTACCATGC TGTGGAAGGC
TATCTTGCGA AATTAGTTCA AATTGGTCAA TCGGTTGCGA TATGTGAACA AATTGGCGAC
CCAGCAACCT CTAAAGGACC AGTTGAGCGT AAAGTGGTGC GTATCGTCAC GCCTGGCACC
TTGACCGACG AAGCCCTGCT GCAGGAACGC CAAGACAATC TATTGGCAGC GGTTTATCAA
GGTAAAATCG GTTTTGGTTA TGCCACTCTG GATGTTTCAT CCGGACGTTT TGTGATTGCC
GAGCTCGACA CGCGAGAGTC ATTAGAAGCT GAATTGCAAC GCACTAATCC CGTTGAAATT
CTCTACAGTG AAGACTTTGG CGAACTAGGT CTACTAAACG GTTTTAAAGG TAAACGTCGT
CGCCCTGAAT GGGAATTTGA TTACGACACT AGCATCAAGT TACTACTGGC TCAGTTTGGC
ACGAAAGACT TGCATGGTTT TGGTATTGCA GATGCACGTT TATCACTGCA GGCTGCAGGT
TGCTTGATGC AATACGTCAA AGACACACAG CGCACAGCCC TGCCCCATAT CAATGCCATT
ACCCGCTTTA ATCAAACCGA TAGCATAGTG CTCGATGCGG CAACGCGCCG AAATCTAGAA
CTCACTCAAA ACCTTGCCGG TGGTCGCGAT AATACCTTAG CCGCAGTATT GGATAACACG
GCGACGCCTA TGGGCAGCCG CATTTTACAA CGCTGGATCC ATCAGCCGCT TCGAGATCCA
AAACACATCC AAGCACGCCA ACAGGCGGTG ACTGAACTAC TCGATACCGC CGCCCACGAA
GGTTTGCATG AACAGTTAAA AGCACTTGGC GATATTGAAC GTATCATGGC AAGACTCGCG
CTGCGTACCG CTCGCCCAAG AGACTTTGCC CGTTTACGTC AAGCGCTGGG CTTACTACCT
GAATTACAAA AGAGTTTAAG CACACTGAGC GCGCCGCACA CGACTCAATT ACGGCAACAC
TTAGGTGAGT TCCCCGCTGA ACAAGCCTTA CTTGAGCGCG CGATAGTCGA TAATCCTCCC
ATGCTTATCC GCGATGGCGG AGTGATCCGT GAAGGCTACA ACAGCGAATT AGATGAATGG
CGCGGTCTTA GCGAAGGTGC GAGCGATTAC TTAGTACAAC TCGAAGCCAG AGAAAAAGAA
CGTACAGGTA TCAACACCCT TAAAGTCGGC TATAACCGTG TACACGGCTA TTACATCGAA
GTGAGTCGCT TGCAATCCTC GCAAGTGCCA CTCAATTACC AACGACGTCA AACCCTTAAG
AATATGGAGC GTTATATCAC GCCCGAACTT AAGGAGTACG AAGAAAAAGT GCTCTCGAGC
CAAGGTAAAG CACTGGCACT CGAAAAGCAG TTATGGGAAC AATTATTTGA TCTTATTCTG
CCAAAATTAC ATGAATTACA AGCTTTTGCT CGAGCGGCGG CAGAACTTGA TGTGTTAAGT
AACTTTGCTG AGCGCGCCGA AACCTTAGGC TACACTTGCC CAGAGCTGAG CCAAGATATC
GGCGTACAGA TAGAGGCTGG TCGTCACCCA GTGGTGGAGC GTGTGAGTCA AACACCGTTT
ATCGCTAACC CAGTCACCTT GCACAATCAA AGACGTATGT TGATTGTCAC CGGACCTAAC
ATGGGCGGTA AATCGACCTA TATGCGCCAA GTCGCCTTGA TCACGCTGAT GGCCCACATT
GGCTGTTTTG TGCCAGCAGG TCGCGCACTG ATAGGCCCTA TCGATCGTAT CTTTACCCGT
ATTGGCGCCT CTGACGATCT GGCCTCTGGC CGTTCAACCT TTATGGTCGA AATGACAGAA
ACCGCCAACA TTCTACACAA CGCCACCGCC AGTAGCTTAG TGTTAATGGA TGAAATCGGC
CGCGGCACAT CCACCTATGA TGGTTTATCG CTCGCTTGGT CGGCAGCAGA GTATTTAGCC
CAGCAAGTCG GCGCTATGAC CCTATTCGCC ACCCATTATT TTGAACTAAC TCAGTTACCT
GAATTAATGG CTGGTGTTTA CAATGTGCAC CTCGATGCCA TTGAACACGA CGATACCATC
GCCTTTATGC ATACAGTGCA AGAAGGCGCC GCCAGTAAAA GCTACGGCTT ACAAGTTGCG
GCGCTTGCCG GCGTACCAAA CAAAGTGATT AAAGCCGCTA AACATAAGTT GCAGCAATTG
GAGAGTCGCG ATCATCAAGC TGAAGGCACG AGGACGCCTA TTCAAAGCTT ACTCGCGTTA
CCTGAACCTG TTGAGAATCC AGCGCTAACG AAGTTAAGTA GCATTAATCC CGATAACTTA
ACGCCAAAAC AAGCACTTGA TTTGCTCTAT GAGCTGAAAC GTCTGAGCTA A
|
|---|
| Protein sequence | MNVIDTDDLE KHTPMMRQYL TMKAEHHDML LFYRMGDFYE LFYDDAKRAS ELLGISLTAR
GKSGGDPIPM AGLPYHAVEG YLAKLVQIGQ SVAICEQIGD PATSKGPVER KVVRIVTPGT
LTDEALLQER QDNLLAAVYQ GKIGFGYATL DVSSGRFVIA ELDTRESLEA ELQRTNPVEI
LYSEDFGELG LLNGFKGKRR RPEWEFDYDT SIKLLLAQFG TKDLHGFGIA DARLSLQAAG
CLMQYVKDTQ RTALPHINAI TRFNQTDSIV LDAATRRNLE LTQNLAGGRD NTLAAVLDNT
ATPMGSRILQ RWIHQPLRDP KHIQARQQAV TELLDTAAHE GLHEQLKALG DIERIMARLA
LRTARPRDFA RLRQALGLLP ELQKSLSTLS APHTTQLRQH LGEFPAEQAL LERAIVDNPP
MLIRDGGVIR EGYNSELDEW RGLSEGASDY LVQLEAREKE RTGINTLKVG YNRVHGYYIE
VSRLQSSQVP LNYQRRQTLK NMERYITPEL KEYEEKVLSS QGKALALEKQ LWEQLFDLIL
PKLHELQAFA RAAAELDVLS NFAERAETLG YTCPELSQDI GVQIEAGRHP VVERVSQTPF
IANPVTLHNQ RRMLIVTGPN MGGKSTYMRQ VALITLMAHI GCFVPAGRAL IGPIDRIFTR
IGASDDLASG RSTFMVEMTE TANILHNATA SSLVLMDEIG RGTSTYDGLS LAWSAAEYLA
QQVGAMTLFA THYFELTQLP ELMAGVYNVH LDAIEHDDTI AFMHTVQEGA ASKSYGLQVA
ALAGVPNKVI KAAKHKLQQL ESRDHQAEGT RTPIQSLLAL PEPVENPALT KLSSINPDNL
TPKQALDLLY ELKRLS
|
|---|
| |