| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3107 |
|---|
| Symbol | |
|---|
| ID | 4841944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 3634468 |
|---|
| End bp | 3635526 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640120358 |
|---|
| Product | permease YjgP/YjgQ family protein |
|---|
| Protein accession | YP_001051457 |
|---|
| Protein GI | 126175308 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0795] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000202116 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAT TAGACCTTTA TATCGCCAGA GTATTGTTAA GCACTTCAGC GCTGTGTTTG
CTGGTGTTGA CTGGCTTGTC GGGCATCATT AAATGGGTTG ACCAGCTGCG CTTAGTCGGT
CGTGGCACCT ATAGCATGAT GGATGCGGGC ATCTATGTGT TGTTTTTAGT GCCACGGGAT
ATCGAAATGT TTTTCCCTAT GGCCGTGCTG CTGGGCGCGT TGATTGGCAT GGGAATGCTG
GCATCGAACT CTGAACTTGT AGTAATGCAA GCTTCTGGCA TGTCACGTTT GCAGATCACT
ATGTCTGCGA TGAAAACCGC TGTGCCCTTG ATGTTGCTGG TGATGGTGTT AGGGGAATGG
GGCGCACCGA TTGCCGAGCA AAAGGCTAAT GAGTTGCAAG CTATTAAACT CTCAGGCGGG
AGTTTAATTA AGTCCCACCG CGGTATTTGG GCAAAAGACG GTGATTTGTT CGTGAACATT
GGTGAAGTTG AAAACATCAA TAAACTCAAC AACATTACGC TTTATAAGTT CAATAGCGAA
CTCAAGCTCA CCAACGTTGT ACATGCGGAC CGCGCGGTGT TTTCCCAAGA CCGTTGGCGT
TTATTCGACG TCAAACGTAC CGATTTAAGC TATGAGAAAG TTGTGCTTGA GTATCTGGAA
GAAGACCAAT GGCAGTCGAG TTTAACGCCG GATAAGCTCA GTGTGGTTTC GATTAAACCT
GAAGCGTTAT CTATCCGCGG TCTGGTCGGT TATCTCGATT ACCTTAAAAC CAACAGCCAA
GATCCTAGCC GCTATGAATT GGCACTGTGG CGCAAGGTGA TGCAGCCGGT GACGGTTGCT
GTGATGATGT TAGTGGCACT GTCGTTTGTA TTTGGGCCGC TGCGAACTGT GACTATGGGC
GCGCGGGTAT TGCTCGGGGT TGTGGCGGGT TTCAGCTTTT ATATCAGTAA TGAGATTTTT
GGTCCTATGA GCATAGTGTA TGAGTTACCT GCCTATGTGG GGGCTGTGGC ACCAAGCTTG
CTGTTTACCG GCGTTGCCTT CTACTTTATC CGGCGATGA
|
|---|
| Protein sequence | MKILDLYIAR VLLSTSALCL LVLTGLSGII KWVDQLRLVG RGTYSMMDAG IYVLFLVPRD
IEMFFPMAVL LGALIGMGML ASNSELVVMQ ASGMSRLQIT MSAMKTAVPL MLLVMVLGEW
GAPIAEQKAN ELQAIKLSGG SLIKSHRGIW AKDGDLFVNI GEVENINKLN NITLYKFNSE
LKLTNVVHAD RAVFSQDRWR LFDVKRTDLS YEKVVLEYLE EDQWQSSLTP DKLSVVSIKP
EALSIRGLVG YLDYLKTNSQ DPSRYELALW RKVMQPVTVA VMMLVALSFV FGPLRTVTMG
ARVLLGVVAG FSFYISNEIF GPMSIVYELP AYVGAVAPSL LFTGVAFYFI RR
|
|---|
| |