Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3088 |
Symbol | |
ID | 4843404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 3613779 |
End bp | 3615080 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640120339 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001051438 |
Protein GI | 126175289 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGATTTG AATCTTTTAG TTTTTCCCCC GAGATTTTGC GCGCTATCTC AGATTGCGGT TATCAACAAA TGACGCCTAT TCAGCAGCAA GCGATACCTG CTATCCGCCG CGGCCAAGAT GTCTTAGCCA GTGCCCAAAC CGGTACGGGT AAAACCGCCG CTTTCGCGCT GCCGATCCTG CAAAAGATGG TTGAAAATCC AAGCGAAACG TTAAAGTCGA ATGCCCGCGT ATTAATTCTT ACGCCGACCC GTGAGCTTGC GGCTCAAGTC GCTGACAACG TTACGGCCTA CTGCAAGTAC TTAAACTTCA GCGTGTTAAC CATTTATGGT GGCGTAAAGA TAGAAACACA AGCGCAAAAG CTGAAACGCG GCGCCGATGT AATTGTTGCC ACCCCAGGTC GCTTACTTGA GCACCTTACC GCCTGTAACT TAAGCCTGTC GAACGTCGAC TTTTTAGTCC TAGACGAAGC CGACCGTATG TTAGACATGG GCTTTAGCGC CGATATTCAA AAGATCCTTC AAGCGGTAAA TAAGAAGCGT CAAAACCTGT TGTTCTCAGC CACTTTCTCA AGTGCGGTTA AAAAACTCGC CAACGATATG ATGGTTAAAC CGCAAGTGAT CAGCGTTGAT AAGCAAAACA CTACGGCCGA TACGGTTAGC CAAGTGGTTT ATCCGGTTGA ACAACGCCGT AAACGCGAAC TGCTGTCTGA GCTAATCGGC AAGAAAAACT GGCAACAGGT CTTGGTATTT ACCGCGACCC GTGATGCCGC CGATACACTA GTCAAAGAAT TGAATTTAGA TGGGATCCCA TCTGAAGTGG TCCACGGAGA TAAAGGCCAA GGCAGTCGTC GCCGCGCCCT GCGTGAGTTT GTGGCAGGTG ATGTACGCGT ACTGGTTGCC ACCGAAGTTG CCGCCCGTGG TCTGGATATC CCAAGCCTTG AATACGTAGT CAACTATGAC TTACCTTTCC TCGCAGAAGA CTATGTCCAC CGTATCGGTC GTACAGGCCG TGCGGGGAAA ACTGGCGTAG CCATTTCTTT CGTGAGCCGC GAAGAAGAAC GTACCTTAGC CGATATCGAA AAACTGATCG GTCAACAAAT TCGCCGCGTC ACTGTGCCAG GTTATGAAGT GGGCAGCCGC GAATTGCTAT TAAAGCAATT GCAAACCCGC CGTAGCTTTG CCAAGAAGCA ACAAAGAACC GACAACGTCG GCGCTCAAGT TACTGCTGAG AAAAACATGC AAGGCCGCCG CGTAAAAATG AAGGTGGGTC AAGCGCCTAG CAAAGCGAAA AAGCTTAAGT AA
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Protein sequence | MRFESFSFSP EILRAISDCG YQQMTPIQQQ AIPAIRRGQD VLASAQTGTG KTAAFALPIL QKMVENPSET LKSNARVLIL TPTRELAAQV ADNVTAYCKY LNFSVLTIYG GVKIETQAQK LKRGADVIVA TPGRLLEHLT ACNLSLSNVD FLVLDEADRM LDMGFSADIQ KILQAVNKKR QNLLFSATFS SAVKKLANDM MVKPQVISVD KQNTTADTVS QVVYPVEQRR KRELLSELIG KKNWQQVLVF TATRDAADTL VKELNLDGIP SEVVHGDKGQ GSRRRALREF VAGDVRVLVA TEVAARGLDI PSLEYVVNYD LPFLAEDYVH RIGRTGRAGK TGVAISFVSR EEERTLADIE KLIGQQIRRV TVPGYEVGSR ELLLKQLQTR RSFAKKQQRT DNVGAQVTAE KNMQGRRVKM KVGQAPSKAK KLK
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