| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3031 |
|---|
| Symbol | |
|---|
| ID | 4845439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 3553720 |
|---|
| End bp | 3554886 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640120279 |
|---|
| Product | putative oxygen-independent coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_001051382 |
|---|
| Protein GI | 126175233 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.472525 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCAA CAGCCATGAC TACTGCGATG AAGCTCGAAC TGCCGCCACT CAGTCTGTAT
ATCCATATTC CCTGGTGCGT ACAAAAGTGT CCTTATTGTG ACTTTAATTC CCATGGCCAA
AATGGTGAGC TGCCACAGGA AGCCTATGTT GATGCGCTAT TGGAAGACTT ACGCCAAGAT
TTACATCTCG TCCAAGGGCG GCAAATTCAT ACCATCTTTA TCGGTGGCGG CACACCATCC
TTATTCGATG CTTTGCAAAT CAAACGCATA CTCGATGGTG CCAATGCGCT AATCCCCTTT
AGTGACAATA TCGAAATCAC CATGGAAGCC AACCCCGGCA CTTTAGAACA CGATGACTTT
AGTGCCTATC GTGCAGCCGG TGTCACCCGT TTATCTATCG GGGTGCAGAG TTTTTCTAAG
GATAAGCTCA ACTTACTTGG ACGTATTCAC GATCAAAACG AGGCACAAGT CGCTGCTCAA
AAAGCCAGCC AAGCGGGATA CTTGAGTTTT AACCTCGATT TAATGCATGG ATTACCCAAC
CAAAGTTTTG CTGAAGCGAT GGCCGATATC GACACGGCAG CGGCGCTCAA TCCGCCCCAC
CTGTCTTGGT ATCAGTTAAC CATTGAGCCC AACACCCTAT TCCACTCAAA ACCGCCGCAG
TTGCCCGATG ACGAAGCGCT CTGGCATATC TATGAGCAAG GTCAACAAAA GCTGGCCGCA
TTAGGGTATG AGCAATACGA AATATCCGCT TATGCGAAAC CCGGTTACCA ATGTAAGCAC
AATCTCAACT ACTGGCAGTT TGGTGATTAT CTAGGCATAG GCTGTGGCGC CCACGGTAAA
GTGACGCTGC CAGAAGAAAA CCGCATTATA CGCACGATAA AAATTAAACA TCCCAAGGGA
TATCTGAGTG CCAGCAACTA CACCTTCGAA TCGATTGATG TGGCAGAGGA AGATCGCGCG
CTTGAATATT TAATGAATCG CCTGCGCCTG ATGACAGCTA TCCCTAAGCA AGAATTTGAA
CTGCGTACCG GACAGCACAG AGACACATTG ACCGAAGGAA TGGAAAAGGC CAAACAACGC
GGTTTACTCA CAGAATCCGC TGAACATTGG CAATTAACCA GCAAAGGTCA CATGTTTGTT
AATGATTTAC TGACACAATT CTGCTAA
|
|---|
| Protein sequence | MSSTAMTTAM KLELPPLSLY IHIPWCVQKC PYCDFNSHGQ NGELPQEAYV DALLEDLRQD
LHLVQGRQIH TIFIGGGTPS LFDALQIKRI LDGANALIPF SDNIEITMEA NPGTLEHDDF
SAYRAAGVTR LSIGVQSFSK DKLNLLGRIH DQNEAQVAAQ KASQAGYLSF NLDLMHGLPN
QSFAEAMADI DTAAALNPPH LSWYQLTIEP NTLFHSKPPQ LPDDEALWHI YEQGQQKLAA
LGYEQYEISA YAKPGYQCKH NLNYWQFGDY LGIGCGAHGK VTLPEENRII RTIKIKHPKG
YLSASNYTFE SIDVAEEDRA LEYLMNRLRL MTAIPKQEFE LRTGQHRDTL TEGMEKAKQR
GLLTESAEHW QLTSKGHMFV NDLLTQFC
|
|---|
| |