| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3025 |
|---|
| Symbol | |
|---|
| ID | 4845191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 3549769 |
|---|
| End bp | 3550467 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640120273 |
|---|
| Product | alanine racemase domain-containing protein |
|---|
| Protein accession | YP_001051376 |
|---|
| Protein GI | 126175227 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
|---|
| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000116618 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAA TAGCAGACAG ACTCGCAATC GCCCAGCGCA GGATCGCACA AGCGGCGCAA
AAATGTGCAC GCCAACCTAG CAGTATTCGC TTACTTGCCG TCAGCAAGAC CAAACCTATT
GAAGACATTA TAGCAGCCTA TCAAGCGGGT CAGCGTTGCT TTGGCGAAAA CTATGTCCAA
GAAGGCGCTG AGAAAATTAC CGCACTCAAG GAGGATTTTC CGGACATTGA ATGGCACTTT
ATCGGGCCAC TCCAATCCAA CAAAACCAAC ATAGTCGCCC AGCATTTCGA TTGGATGCAC
ACTGTCTCGC GCGACAAAAT TGCCCAACGT CTCAATGACC AACGTCCAGC TGAATTAGCG
CCATTGAACG TCTGCATTCA AATTAATATC AGTGCTGAAG ACACAAAATC TGGCATAGAT
GCGGCGCAAA TGCTGCCACT GGCCGAGCTG ATCGCTCAGC TACCTAATCT CGCACTGAGA
GGCCTAATGG CGATCCCAAC GGCTACCGCA GATACTGAGT TACAGCTTAA AGAGTTTTCT
ATGTTAAACA ATCTATTTCA AGAACTTAAA TCGCATTACC CTAGCGTAGA CACGCTTTCC
ATGGGGATGA GTAATGACCT AGATGCAGCG ATTAGCTGCG GTTCAACTAT GGTGCGTATT
GGCAGTGCCA TTTTTGGTGA GCGCAATTAC GCTGCGTAA
|
|---|
| Protein sequence | MTTIADRLAI AQRRIAQAAQ KCARQPSSIR LLAVSKTKPI EDIIAAYQAG QRCFGENYVQ
EGAEKITALK EDFPDIEWHF IGPLQSNKTN IVAQHFDWMH TVSRDKIAQR LNDQRPAELA
PLNVCIQINI SAEDTKSGID AAQMLPLAEL IAQLPNLALR GLMAIPTATA DTELQLKEFS
MLNNLFQELK SHYPSVDTLS MGMSNDLDAA ISCGSTMVRI GSAIFGERNY AA
|
|---|
| |