| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3023 |
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| Symbol | |
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| ID | 4845189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 3547574 |
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| End bp | 3548686 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640120271 |
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| Product | twitching motility protein |
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| Protein accession | YP_001051374 |
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| Protein GI | 126175225 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000138917 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATGTTC TTCCGTTTTT AAAAGTGATC GTTGAGCGCA AAGCCTCCGA CTTGTTCATC
ACAGCGGGCT TTCCGCCAAG TGCCAAGATT GACGGTGAGT TGCGTCCCTT GGCCGAAAGT
GCCTTTACTC CGGCACAATC AATGGATTTT GTTGAATCCT TAATGACCGA AGCGCAGAAA
CAAGAGTTTC ATTCAACTCG TGAGTGTAAC TTTGCTTTTG CTGCAAAGGA TTTAGGTCGT
TTTCGGGTGA GCGCCTTTTG GCAGCGTGAA TCGCCAGGCT GCGTGATGCG TCGTATCGAA
ACTAAAATCC CTGACGTCGA TGATTTAAAA CTGCCACCCA TTCTGAAAGA TCTGGTGATG
AGTAAACGTG GTCTCATTAT TATGGTGGGC GGAACGGGTA CGGGTAAGTC AACATCTCTG
GCGGCCTTGG TGGGATATCG TAATGGTCAT GCTCGTGGTC ATATTCTCAC GATTGAAGAT
CCAGTCGAAT TTGTTCACGA CCACAGAAAA AGCATTATCA CTCAGCGTGA AGTGGGCATA
GATACTGAGT CTTTCGATGC GGCGCTAAAA AGCTCCCTTC GCCAAGCACC CGATGTGATC
TTGATTGGTG AAATTCGTAC CCAAGAGACG ATGGAGTTCG CCCTGTCGTT TGCGGAAACA
GGCCACCTCT GTATGGCAAC CTTGCATGCC AACAACGCCA ACCAAGCATT AGACCGCATT
ATGCACCTCG TGCCTGAGAG TAAACATCAA CAGTTATTGT TCGATTTGTC ATTGAATTTA
CGCGGGATTG TGGCGCAGCA ATTGATCCCA AAAGTCGATG GCACTGGGCG TCGCGCCGCG
ATTGAAGTAT TGATTAACAC CCCAAGGGTG GCGAGTTTAA TTGCGAAGAA CGAGCTGCAT
TTGCTCAAAG AAACCATGGC CAAATCGAAT GAGCAGGGCA TGCAGACGTT CGATCAAGCC
TTGCTCAAAC TTTATGTCGA TGGCGAGATT AGTTACGCCG ATGCGCTGCA CCATGCTGAT
TCACCGAACG ATTTACGTTT GATGATTAAG TTGCAGAATA AAGAATCCAC GGGCTCAGGC
TTTATGGAAG GTGTCACCTT AGACATGGAT TAA
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| Protein sequence | MDVLPFLKVI VERKASDLFI TAGFPPSAKI DGELRPLAES AFTPAQSMDF VESLMTEAQK
QEFHSTRECN FAFAAKDLGR FRVSAFWQRE SPGCVMRRIE TKIPDVDDLK LPPILKDLVM
SKRGLIIMVG GTGTGKSTSL AALVGYRNGH ARGHILTIED PVEFVHDHRK SIITQREVGI
DTESFDAALK SSLRQAPDVI LIGEIRTQET MEFALSFAET GHLCMATLHA NNANQALDRI
MHLVPESKHQ QLLFDLSLNL RGIVAQQLIP KVDGTGRRAA IEVLINTPRV ASLIAKNELH
LLKETMAKSN EQGMQTFDQA LLKLYVDGEI SYADALHHAD SPNDLRLMIK LQNKESTGSG
FMEGVTLDMD
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