Gene Sbal_3012 details

Gene Information

• Locus tag: Sbal_3012
• ID: 4845178
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: +
• Start bp: 3539818
• End bp: 3540408
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640120260
• Product: OmpA/MotB domain-containing protein
• Protein accession: YP_001051363
• Protein GI: 126175214
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.000000126863
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAAACT CCCAATCTCG ATGGATTCAG CTGGTACTTT TACTATTAAG TTTAAGCCTG 
ACATCGCAGG TATTCGCTTG GTCTGATACT GACCAAGATG GCGTGCCTGA CATCAAAGAT 
GCCTGCCCTA ACACAGCGCC AGACACGCAA GTAATGGCCA ATGGCTGTGT TGAAGAGGTA 
GAGGTGGAAG CGACTGCATC AGCAGATTGT AGTACGAGTA ATCCCAATGC TGAGTTCAGC 
GCAGATTGTC ATAATATTTC TACCGCTGTG GTGTATTTTG AATTTGCCAT TGCCGAAGTT 
GACTTTTCGC AATGGAAAAC TTTAGCCTTA GTGAAAGCAT ATTTAGCAGC GAATGATGTC 
GCATTAACCT TAGTGGGCCA CACGGATATC GTTGGCACGC CTGAGTTTAA TTATCAGCTG 
TCACTTCAGC GCGCTCAAAA TGTGAAACGT ATTTTGGTTG AAGATTATGG CTTTAATCCA 
AATCGCTTTA CCGTAATGGG TAAAGGTATA TCTGAACCTG TAGCGGACAA CCGTTCTAGC 
GAAGGGCGCA GTTTAAATCG ACGAGTACAA TTTATCGTCA ATAATAAATA G 

 

Protein sequence

MKNSQSRWIQ LVLLLLSLSL TSQVFAWSDT DQDGVPDIKD ACPNTAPDTQ VMANGCVEEV 
EVEATASADC STSNPNAEFS ADCHNISTAV VYFEFAIAEV DFSQWKTLAL VKAYLAANDV 
ALTLVGHTDI VGTPEFNYQL SLQRAQNVKR ILVEDYGFNP NRFTVMGKGI SEPVADNRSS 
EGRSLNRRVQ FIVNNK