Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3006 |
Symbol | |
ID | 4842784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 3531925 |
End bp | 3533328 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640120254 |
Product | extracellular solute-binding protein |
Protein accession | YP_001051357 |
Protein GI | 126175208 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCTGCT ACGCAGAGTT TTCATTGGCA CAAATCCCAC CGCTCACGAA CAAAACGCCC ATCACCTTAG TCGCAGAAAA AGGATTTTGG ACCGACTATT TAACCCAAGA AATGTTGCCT AAATTTACCG AAAAAACTGG CGTCAAAGTG CAAGTGATCA GCACTGAGCT AGACACTATG TTTAACTTAC AGACCCAAGA TTTACTCCAA GGTTCGGGCA AATACGACTT GCTAACGATG GAAGCTGGCT GGGCAAAAGA ATGGGCCGCC AATGGCTACA CTGTGCCCTT AGTCGAACTC GCGAAACTGT ACGATCCCGA TGGCGAAAAG GCCATGGAGA AATACCTAGA ACCCTATTAC CCATCGCTAC TGAATATTTT ATCCTACCAT GGTGAAATCC ATGCGATTCC CTACAACAAC TATGTGATGG GCAATCATTA CCGAGCAGAT CTCTTCGATA ATAAAACCGA AAAAACACGC TTTCAGAGCC AGTTCGGCTA CCCGCTCGCG CCAGCAAAAA CCTTAACCGA GTTACGGGAT CAAGCCCAGT TCTTCACTCG TAAAGCGGGC GCTATGTTGG CGGATAAAAT GTTGACCCAC GACTTTTACG GCCTAGCGCT AATGTCGGGC GATAAGCCGC ATATTAACGA TGAATTTTCC AGCATGATCT GGAGCTTAGG CGGCGCTTGG ATGCAGCCAA TTTATAACGA CCAAAAACAG ATCAGTCATT TTGAAGTGCC GACCATCAAC CATGAAGCCA TTGAAACCGC CAAGCTTTAT CGCGAATTAA TGCCCTATGC CGTACCTGTT AACGAGCAAT TTGCCTTCAA TGAGGCCGCC AATGCAATCG CTACAGGCCA AGCGGCAATG TGGCCTTTTG CCTACAATAA TTTGTGGCAC AAATCTTTTA AAGTTGAACA AAATATTCCC GGCGCACGCC TTGCGGTGAG TCAAGTGCCC GGCGGTTATC CCTATAACGG CGCCTATGCT TTTGCCGTGA GCTACGACAG CAAAAATCCC CAAGCGGCCT ATTGGCTCAT CAAATACATG GGCACCTATG AGGCGCAACA CGCTTATGCC CTCGGCGGCG GTAATCCCTG TCGTATGGAT GTCGTGACCG CCCCCGAATT TAAAAGTGAA TCGTTAAGGA CCATAGCGGG CGCATTCGAG GCAAGCCATA TCGCTAATAT GTTTTGGTCA ACGAAAGTGC TAGAACTTGG GCATTTTACC AGTACCGCCA TGGGACAGAT TTACCCTGAA CTCAGCCATG CTTGCTATCG CGCTAGCCGC AGGCCCGCTG ACAGCGAGGA TATTTTCATT AAATTAAGTG CAGAGATAAA ACACCTCCAA AATACCTATG GAGAGGTACC TGCTATTGAC AAGAAAACCA ATGACAAGCA CTAA
|
Protein sequence | MPCYAEFSLA QIPPLTNKTP ITLVAEKGFW TDYLTQEMLP KFTEKTGVKV QVISTELDTM FNLQTQDLLQ GSGKYDLLTM EAGWAKEWAA NGYTVPLVEL AKLYDPDGEK AMEKYLEPYY PSLLNILSYH GEIHAIPYNN YVMGNHYRAD LFDNKTEKTR FQSQFGYPLA PAKTLTELRD QAQFFTRKAG AMLADKMLTH DFYGLALMSG DKPHINDEFS SMIWSLGGAW MQPIYNDQKQ ISHFEVPTIN HEAIETAKLY RELMPYAVPV NEQFAFNEAA NAIATGQAAM WPFAYNNLWH KSFKVEQNIP GARLAVSQVP GGYPYNGAYA FAVSYDSKNP QAAYWLIKYM GTYEAQHAYA LGGGNPCRMD VVTAPEFKSE SLRTIAGAFE ASHIANMFWS TKVLELGHFT STAMGQIYPE LSHACYRASR RPADSEDIFI KLSAEIKHLQ NTYGEVPAID KKTNDKH
|
| |