| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2987 |
|---|
| Symbol | |
|---|
| ID | 4843274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 3513939 |
|---|
| End bp | 3515126 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640120235 |
|---|
| Product | outer membrane protein assembly complex subunit YfgL |
|---|
| Protein accession | YP_001051338 |
|---|
| Protein GI | 126175189 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1520] FOG: WD40-like repeat |
|---|
| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.198648 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCTT GGTGCAAAAA CCTGCTAGCC GCCGGATTAA GTCTGGCTAT GTTATCCGCC
TGTTCGTCGA GCGATGTTGA AGACGAGCCT GTCAGTGAGT TAACTGCCAT TCAGGCGACA
GTGTTCCCTG AAGTAAGTTG GAGCGCCTCT GTCGGTGATG GTGTAGGTGA TTATTATTCT
CGCCTCGCTC CTGCCGTCCG TTATGGAAAA ATCTTTGCTG CCGATCGTTA TGGCGAAGTC
ACCGCGTTTG ATGAAGCGAC TGGCGAGCGC GTTTGGACTA AAGATTTCAG CGAAGAATTT
CGTGATAACG CGTTAGCAAA AAACAAAGGT GCGCGTATTG CTGCCGGCGT GACTGCTGCG
CGTAATAAAG TCTTTTTAGG TGGTGAAAGC GGCCTGTTAG CCGCGCTGAA CGCCGAAGAT
GGCCAAGTGT TATGGCATGT GATTGCGGGC GGTGAATTAC TGTCTGCACC AACGGTTGCC
GATGACGTCG TGGTTGTCAG CACCAGCTCT GGTTCACTCG AAGCCTTTAA CGTCGATACT
GGCGCTAAGT TATGGGTGTA TGAAATGCAA TTGCCGAATC TGACCCTGCG CGGTACAAGT
TCTGCAGCTT ACGAAGCGGG TGGTTTCTTC ATCGGTACTG CCGATGGCAA AGTGGCTGTT
GTGATTAAAA ACAATGGTCA AGCTGCATGG GAACAGGCGA TTTACAATCC AACGGGCGGT
AACGAGTTTA CGCGTATGGC CGACGTGGAT ATGACGCCGC TGATCCTTGG CGACAACTTA
TATGCGGTGA GCTACAACGG TAACTTAGTG TCGATGGAAC TGCGCACGGG TCGAGTTGTG
TGGACACGTA AGTATTCTAG CTTTAACGAG TTAGCATCAG CGGGCTTAAG TTTGTTCGTC
GTTGACGATC ACAGCCGTAT CTACTCAGTT GATAAACGTA ACGGTCTAGA ACTGTGGAGC
AACTCAGAGT TAGCTAACCG CACTCTGACG TCACCGGCTG TGTATAAAGA CTATTTAGTT
GTGGGTGATT TCGAAGGTTA TTTACACTTC ATCGATCGCA GTACAGGGAC GATTGTGGGT
CGTGTCCAAG TGGACAGCTC TGGATTATAC AGCCAGCCAT TAGTGGTTGA CGATAAAATC
TATGTTCAAG GTCGCAGTGG AAAGTTAGCT GTTGTAACAC TTCCATAG
|
|---|
| Protein sequence | MKSWCKNLLA AGLSLAMLSA CSSSDVEDEP VSELTAIQAT VFPEVSWSAS VGDGVGDYYS
RLAPAVRYGK IFAADRYGEV TAFDEATGER VWTKDFSEEF RDNALAKNKG ARIAAGVTAA
RNKVFLGGES GLLAALNAED GQVLWHVIAG GELLSAPTVA DDVVVVSTSS GSLEAFNVDT
GAKLWVYEMQ LPNLTLRGTS SAAYEAGGFF IGTADGKVAV VIKNNGQAAW EQAIYNPTGG
NEFTRMADVD MTPLILGDNL YAVSYNGNLV SMELRTGRVV WTRKYSSFNE LASAGLSLFV
VDDHSRIYSV DKRNGLELWS NSELANRTLT SPAVYKDYLV VGDFEGYLHF IDRSTGTIVG
RVQVDSSGLY SQPLVVDDKI YVQGRSGKLA VVTLP
|
|---|
| |