| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2891 |
|---|
| Symbol | |
|---|
| ID | 4844336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 3402863 |
|---|
| End bp | 3403840 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640120139 |
|---|
| Product | lipopolysaccharide biosynthesis protein |
|---|
| Protein accession | YP_001051243 |
|---|
| Protein GI | 126175094 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3765] Chain length determinant protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACAC AAATTACTCA AAATCCAAAT ACATATAAAA CAGACGCGCA ATTCCCTCAA
ACCACAAGCG ATGACGAAAT CGATCTTCGT GAATTGTTCT CTGTCATCTG GCAAGGCAAA
TGGTTAATCA TTGCCATTAC AGCTGTATTC GCTATTGGTG CAGTTATTTT TGCCATAAAA
CAACCCAATA TCTATAAATC TGAAGCCCTG CTTGCGCCTG CATCTGAAGA GAAAGGTGGC
GGTTTAAGTG CGTTAGCGTC TCAGTTTGGC GGTTTAGCTA GCCTTGCAGG TGTAAATCTC
GGTGGTAAAG GTGGTACTGA TAAAACTGAA TTGGCAATTC AAGTATTAAA GTCTCGCCAA
TTTACCAGCG AGTTTATTCA AAAGCACAAT ATCCTTGCTG ATTTAATGGC TGCTGAAAAA
TGGGATAGGG ATGCAGATAA ACTTATCTAT GATCCTGACC TATATAACGA GCAAACCAAT
ACTTGGGTGC GTGAAGTTAA AGCGCCATTT AAACCTGAGC CATCAATGCA AGAGGCTTAT
AAAGCCTTTA GCAAAATGAT TGCTGTTAAT AAAGCGAAAG AAACTGGAAT GGTCACTATT
TCAGTTGAGC ATTTATCACC AGCTGTTGCG CAGCAGTGGG TTGCTTGGTT AATCCAAGAT
ATTAATAAAG TAATGAAAGA CCGCGATGTA GCTGAGGCGA ATCGTAGCAG TGAGTTTTTA
AATAAACAAA TTGCTTTAAC TAATGTGGCA GATATTCGAA CCATTTTGTA TAAGTTAGTA
GAAGAACAAG CTAAAACCAT TATGTTTGCT GAAGTGCGTG ATGAATACGT TTTTAAAACC
ATCGATCCTG CATTAGTACC AGAAGAAAAA GCAAAACCTA AACGCGCATT AATTTGCGTA
TTAGGTACAC TGCTTGGCGG TATGTTAGGG GTAATGCTAG TGCTAGTCAG GCATTTTGTA
AGAAAAGACG CAGCATAA
|
|---|
| Protein sequence | MNTQITQNPN TYKTDAQFPQ TTSDDEIDLR ELFSVIWQGK WLIIAITAVF AIGAVIFAIK
QPNIYKSEAL LAPASEEKGG GLSALASQFG GLASLAGVNL GGKGGTDKTE LAIQVLKSRQ
FTSEFIQKHN ILADLMAAEK WDRDADKLIY DPDLYNEQTN TWVREVKAPF KPEPSMQEAY
KAFSKMIAVN KAKETGMVTI SVEHLSPAVA QQWVAWLIQD INKVMKDRDV AEANRSSEFL
NKQIALTNVA DIRTILYKLV EEQAKTIMFA EVRDEYVFKT IDPALVPEEK AKPKRALICV
LGTLLGGMLG VMLVLVRHFV RKDAA
|
|---|
| |