Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_2887 |
Symbol | |
ID | 4843437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 3399165 |
End bp | 3399728 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640120135 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_001051239 |
Protein GI | 126175090 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.301522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTCG AGAGAAAAAT GAACATCATC GACACCAAGA TTCCTGAAGT AAAAATAATT GAGCCGGCTG TTTATGGCGA TGAGCGAGGT TTCTTTATGG AAACCTGGAA TCAACAAAAG TTTGAAGAAC TTGTGACTGG TAAATTAACA AGATTTGTTC AAGATAATCA CTCTAAATCT AAGAAAGGAA TCTTGCGAGG GTTACATTAT CAAACTGAAA ATACGCAGGG CAAATTAGTT CGTGTTGTTT CTGGTGAAGT ATTCGATGTA GCTGTTGATA TTCGTAAAGA CTCACCTAGT TATGGCTATT GGGTTGGTGA ATATTTATCT GCCGAAAATA AACGTCAGTT ATGGGTACCA GAAGGATTTG CTCATGGTTT CTATGTAACA AGCGAAGAAG CTGAATTTGT TTATAAATGT ACTAATTATT ATAATCCAAA CTCAGAAGTA TCGATTTTGT GGAGTGATAA ATCTTTAGAT ATTAAATGGC CAATCCAGTC TTCTCCCGAA TTGTCAAAAA AAGACCAACA AGGTGTTCTG CTTCAGCTTG CACCCATGTT GTGA
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Protein sequence | MNLERKMNII DTKIPEVKII EPAVYGDERG FFMETWNQQK FEELVTGKLT RFVQDNHSKS KKGILRGLHY QTENTQGKLV RVVSGEVFDV AVDIRKDSPS YGYWVGEYLS AENKRQLWVP EGFAHGFYVT SEEAEFVYKC TNYYNPNSEV SILWSDKSLD IKWPIQSSPE LSKKDQQGVL LQLAPML
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