Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_2876 |
Symbol | |
ID | 4843426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 3387765 |
End bp | 3389705 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640120124 |
Product | polysaccharide biosynthesis protein CapD |
Protein accession | YP_001051228 |
Protein GI | 126175079 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTTT TGCAGTGTTT ATTTTCTTTA AAGCGGGCAC AGAAGCGTCT AGTGAGTGTC GCGATTGATT CGGTATTTCT CTTAGTCGCA TTTTGGGCTG CTTTGTTGGT ACGTTTGGAT GCCGTAAGCG TATTTACTAA TAGCGTATAC TGGTTGCTCA TTGTTTTGGT TGTGCCTGTG AGTATCATGG TGTTTGCTAA GCTGGGATTG TATCGTGCTG TGCTTAGATA TATGGGATTG CAGGCGCTAA CTGCGATTAT TGTTGGGGTT CTTGCATCAA CAGTGTCGTT AGTGTTAATT GCGTATTACA GTGAGGCGAA TTTACCCCGT ACGGTACCAA TTATTTACGC AGCTTTTGCC TTGGTATTTG TCGGTGGAAC TCGCGCTATG GTGCGCTCGT TAGTAGGGTC TGGTCTAAAG CGGGTTGGCG AACCTGTGAT TATTTATGGG GCAGGGGTCA GCGGACGGCA GTTAGTGACC TCATTGGTCC AGAGTCATGA ATATTATCCT TTTGCATTTG TTGATGATGA TGTGACTTTA CATGGCACTG TCATCCAAGG AGTGCATGTT CATTCGCCTT CTATTATTAA AAAACTCATC ACACAAAAAG CAGCTACTAA AGTGTTGCTG GCTATGCCAA GTGCTTCTCG CTCTCGTCGC CAAGAGATTT TAGTTAAGCT CGAACCTTTG GCTGTACAAG TTTTAACCTT ACCTGCAATG GCTGATCTGG TAAGTGGTAA TAAGCTTTAT AGCGATATTA AAGAAGTCGA AATCGATGAT TTGTTAGGAC GTGATGCAGT TACTCCCCGT TGCGACTTAA TGGTCGCCAA TATCCGCAAC AAAGTAGTGA TGGTCACGGG AGCTGGCGGC TCGATTGGTT CTGAGTTATG TCGACAGATA TTAAAACAAT CACCTAAAAA ATTAGTGTTA TTTGAATTAT CTGAGTTTGC CTTGTATACG ATTGATCGTG AACTTTCTGC GACAGCTTTT GAGTTAGGGC TTGATGTTAA GATTTTACCA ATTATGGGTT CGGTACAACG GGAAAATCGT GTTCAAGCAG TAATGCAATC TTTTAGAGTG CAAACTGTGT ATCACGCTGC AGCTTATAAG CATGTGCCAT TGGTGGAGCA CAATGTCGTT GAAGGTGTGC GTAATAATAT ATTTGGTACT TTATATACTG CACGCGCAGC TATTGCAGCT AAGGTTGAAA CTTTTGTATT GATTTCGACG GATAAAGCTG TACGACCTAC TAATATCATG GGCACTACTA AGCGTATGGC CGAGTTGGCA CTTCAAGCGT TATCTAAAGA AACACATCAA ACCCGTTTTA GCATGGTTCG CTTTGGTAAT GTTTTGGGCT CTTCAGGTTC TGTAGTGCCA TTATTCCGAA AGCAAATTGC TAATGGCGGC CCTGTTACTG TTACGCATCG TGACATAACT CGTTTCTTTA TGACCATTCC TGAGGCTTCA CAGTTGGTTA TCCAAGCGGG GGCAATGGGC AAAGGTGGCG ATGTGTTCGT GCTTGACATG GGTAAAGCAG TTAAAATTGT TGATTTAGCT GCAAAAATGA TTCGCCTTAG CGGTTTTGAA GTAAAGGATG AACTCAATCC CGATGGTGAT ATTGCCATCG AGTTTAGTGG CTTACGTCCT GGTGAAAAAT TATACGAAGA ATTACTGATT GGTGATGATG TTACTGGCAC CGAACATGAG CGTATTATGA CAGCCAACGA AATTTTTCTT TCTTGGAAAG AGTTAGAATG TATTCTTAAT CGCTTAGATA AAGCTTGTCA TGAGTTTAAT CATGAAGCTA TACGAGAAAT CTTACTGTCT GCACCAACAG GTTTTAATCC AACAGACGGG ATATGCGATT TAGTGTGGCA ACAAAAGAAA AAATTAAGCG CTGTTGATGG CCAAAATAAA GTTGTTCCAT TAGTTTCTTA G
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Protein sequence | MEFLQCLFSL KRAQKRLVSV AIDSVFLLVA FWAALLVRLD AVSVFTNSVY WLLIVLVVPV SIMVFAKLGL YRAVLRYMGL QALTAIIVGV LASTVSLVLI AYYSEANLPR TVPIIYAAFA LVFVGGTRAM VRSLVGSGLK RVGEPVIIYG AGVSGRQLVT SLVQSHEYYP FAFVDDDVTL HGTVIQGVHV HSPSIIKKLI TQKAATKVLL AMPSASRSRR QEILVKLEPL AVQVLTLPAM ADLVSGNKLY SDIKEVEIDD LLGRDAVTPR CDLMVANIRN KVVMVTGAGG SIGSELCRQI LKQSPKKLVL FELSEFALYT IDRELSATAF ELGLDVKILP IMGSVQRENR VQAVMQSFRV QTVYHAAAYK HVPLVEHNVV EGVRNNIFGT LYTARAAIAA KVETFVLIST DKAVRPTNIM GTTKRMAELA LQALSKETHQ TRFSMVRFGN VLGSSGSVVP LFRKQIANGG PVTVTHRDIT RFFMTIPEAS QLVIQAGAMG KGGDVFVLDM GKAVKIVDLA AKMIRLSGFE VKDELNPDGD IAIEFSGLRP GEKLYEELLI GDDVTGTEHE RIMTANEIFL SWKELECILN RLDKACHEFN HEAIREILLS APTGFNPTDG ICDLVWQQKK KLSAVDGQNK VVPLVS
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