| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2818 |
|---|
| Symbol | |
|---|
| ID | 4843179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 3316781 |
|---|
| End bp | 3317647 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640120068 |
|---|
| Product | acyl-CoA thioesterase II |
|---|
| Protein accession | YP_001051172 |
|---|
| Protein GI | 126175023 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1946] Acyl-CoA thioesterase |
|---|
| TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.214306 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAGG TATTAGACGA TCTTTTATCA TTACTTTCCC TTGAGCAAAT TGAAATCGGC
CTCTTTCGTG GTCAGAGCCA AGATCTGGGA TTTGGGCATG TGTTTGGTGG TCAAGTGATG
GGGCAAGCGC TGAGCGCCGC TAAACAAACC GTCCCCGTTG AGCGTAAGGT CCACTCATTA
CACTCCTACT TTTTACGTGC TGGTGACGAG AAGTTACCGA TTGTGTATGA AGTCGAAAAT
ATGCGGGATG GCGGCAGTTT TAGTGCCCGC CGCGTCAGTG CAATTCAAAA AGGTCGACCG
ATTTTCCACA TGACCTGTTC CTTCCAAGAA CCTGAAGAAG GATTTAGTCA TCAAGCGATG
ATGCCGCAAG TACCAGGACC AGAAGGTTTA TTGAATCAGC AGGAATTAGC GCTGACGATG
CGGGATAAAG TGCCGCCGAG TATACTCGAA AAGTTTATGG CCGATGCGCC CATTGAGATG
CGACTGGTTA ATCCATTACA TCCCTTTGCG CCCAAAGAAA CCGAGCCGTA CCGTCATGTG
TGGATGAGGG CCAATGGGCC CATGCCAAAT GACGCCCATA TTCATGAATA TCTACTCGCC
TATGCCTCGG ACTTTAACTT TTTGGTGACA GCGGCTCAGC CCCACGGCGT GTCGTTTTTA
AGTCCTGGAG TGCGCATGGC GACGATAGAT CATGCGATGT GGTTCCATCG CCCGATTAAT
ATGGGAGAGT GGTTGCTTTA CAGTATTGAT AGCCCCAATG CCAGCGGTGG CAGAGGTTAC
GTCAGAGGGC AGTTTTTCAA TCAACAAGGT GAATTAGTGG CTTCTTCTAC CCAAGAAGGC
CTGATCCGCA TGGTAAAAGG ACGTTAA
|
|---|
| Protein sequence | MSQVLDDLLS LLSLEQIEIG LFRGQSQDLG FGHVFGGQVM GQALSAAKQT VPVERKVHSL
HSYFLRAGDE KLPIVYEVEN MRDGGSFSAR RVSAIQKGRP IFHMTCSFQE PEEGFSHQAM
MPQVPGPEGL LNQQELALTM RDKVPPSILE KFMADAPIEM RLVNPLHPFA PKETEPYRHV
WMRANGPMPN DAHIHEYLLA YASDFNFLVT AAQPHGVSFL SPGVRMATID HAMWFHRPIN
MGEWLLYSID SPNASGGRGY VRGQFFNQQG ELVASSTQEG LIRMVKGR
|
|---|
| |