| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2630 |
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| Symbol | cpdB |
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| ID | 4843861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 3079479 |
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| End bp | 3081524 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640119867 |
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| Product | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein |
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| Protein accession | YP_001050992 |
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| Protein GI | 126174843 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | [TIGR01390] 2',3'-cyclic-nucleotide 2'-phosphodiesterase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.37925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAATA AGAAAATACT CGCAGTGATG ATCACTGCCG CCCTTGGTGT CAGCGCCTGT
AATTCTGATG ACGACAAAGT CGTTCAAGCC GATTTACGGG TACTCGAAAC CACAGATCTG
CACACAAATA TCATGGATTT CAACTACTAC AGTGGTAAAG ACGATCCGAC TATCGGTCTT
GCCCGCACTG CAAGCTTGAT CCACGCTGCA CGCAACGAAG CCAAGAATAG CGTCCTCGTT
GATAACGGCG ATCTACTGCA AGGCAGCCCT ATGGGCGATT ATATGGCCAA AGTTGGCCTG
CAAATGGGCG ATGTTCACCC TGCTTATAAA GCCATGAACC TATTAGATTA TGAAGTCGGC
AATATCGGTA ATCATGAATT TAACTATGGT TTAGATTTCT TAAATAAATC CATTAGTGGT
GCAGATTTCC CTTATATCAA CTCGAACGTT TATTGCGCCG ACGAGAATGG TTGCTGGAAA
GAAGTTAAAA AAGGTGAGCA TTTATTCACC CCTTATATCA TCAAACAAAA AATTATTATC
GACAGCGAAG GTAATAATCA AACCATTAAC ATTGGTTATA TTGGTTTTGT GCCACCGCAA
ATTCTATTGT GGGATAAGCA AAATCTGACG GGTAAAGTGA CGGTTGAAGA TATCGTTACC
ACCGCGAAAA AATATGTTCC CGAAATGAAA GCCAAAGGGG CTGATATCAT TATCGCCATT
CCACACTCTG GCATTGGTTC GACGGAAAAT CCTGGCGATC CTATGGCTGA AAACGCCACC
TACGCTTTGA CTTATGTTGA CGGTATCGAT GCGATTCTAT TCGGCCACAG CCACTCTATC
TTCCCAGATG CTAAGTATGC CGACTTACCC AATACCGATG TCACTAAAGG CCTACTGAAC
GGCGTCCCCG CAGTGATGCC AGGTCGTTGG GGCGATAACT TAGGGGTGGT TGACTTTAAA
CTTGAGCGTA GAGATGACAA GTGGCATGTC CTTAGTGCCA AAACGCAAGC TCGACCTATA
TATAATGGTG CAACTAAGGA AGAGTTAGTT AGCCAAGATC CTGCAATTAA AGATGCTGTC
GCAGCAGAGC ACCAAGGTAC CCTCGCCTTT GTGGATGAAC CTATCGGTGT CGCCGCGGCT
GACATGTATA GCTTCCTCAC CTTAGTGCAA GACGACCCTA CGGTACAAAT CGTTTCCGAT
GCGCAAATCG CTAACGTGAA AGCGAAATTA CCTGCGGCAT TAAAAGGGTT ACCAGTACTG
TCAGCCTCTG CACCTTTTAA AGCGGGCGGT CGCCACGGTA CAACCAGCGA TGCCGATCAA
TTTGTGCAAG TCGATAAAGG TCCATTGACC TTTAAAAACG CCGCAGATCT GTACCTGTAT
CCCAATACTA TGGTGGCAGT CAAAGCGACG GGCGCCGAAT TGAAAGATTG GCTTGAGTGC
TCAGCCAACC AGTTCAATCA AATCGACCCA GCAAAAACCA CCCCACAAGA GTTAATCAAC
TGGGATGGCC ATCCAACCTA TAACTTCGAC GTACTCGATG GCTTAACTTA CAAAATTGAT
GTCACTCAAC CGAACAAGTT TGACCGCGAT TGCGCCGTCG TTAATGCCAA CGCAAACCGT
ATCGTTGATT TAAGCTATAA AGACGAAAAC GGTAAAGTCA TCACAGGTGA AGAATTTGCC
GCGAAAGAGT TTATCGTCGC CTCAAATAAC TACCGCGCCT TTGGTGGTAA ATTTGCCGGT
ACGGGTAGCG ACCATGTCGT GCTCGAACTG CCCGATACCA ACCGTGAGGC GTTAGCGGCT
TATATCACAG CGCAATCTCA GTACAACGAA ACCACGGGTA AGTACGAAGG TATGGTCAAT
CCAAGTGCCG ATTACAACTG GGATTTCAAA ACAATCACGA CCAACGTCAC ATTAGACGTT
CGCTTCCAAA CCCAAGACAG TGACAAAGCC GCGGCATTTA TCGAAGCCAA TAAACAACGT
GAAATGAAAA AGATCAGCAA GGATGAACTG GGTTTCGCCG TTTATAGCAT CAACCTAACC
AAATAA
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| Protein sequence | MLNKKILAVM ITAALGVSAC NSDDDKVVQA DLRVLETTDL HTNIMDFNYY SGKDDPTIGL
ARTASLIHAA RNEAKNSVLV DNGDLLQGSP MGDYMAKVGL QMGDVHPAYK AMNLLDYEVG
NIGNHEFNYG LDFLNKSISG ADFPYINSNV YCADENGCWK EVKKGEHLFT PYIIKQKIII
DSEGNNQTIN IGYIGFVPPQ ILLWDKQNLT GKVTVEDIVT TAKKYVPEMK AKGADIIIAI
PHSGIGSTEN PGDPMAENAT YALTYVDGID AILFGHSHSI FPDAKYADLP NTDVTKGLLN
GVPAVMPGRW GDNLGVVDFK LERRDDKWHV LSAKTQARPI YNGATKEELV SQDPAIKDAV
AAEHQGTLAF VDEPIGVAAA DMYSFLTLVQ DDPTVQIVSD AQIANVKAKL PAALKGLPVL
SASAPFKAGG RHGTTSDADQ FVQVDKGPLT FKNAADLYLY PNTMVAVKAT GAELKDWLEC
SANQFNQIDP AKTTPQELIN WDGHPTYNFD VLDGLTYKID VTQPNKFDRD CAVVNANANR
IVDLSYKDEN GKVITGEEFA AKEFIVASNN YRAFGGKFAG TGSDHVVLEL PDTNREALAA
YITAQSQYNE TTGKYEGMVN PSADYNWDFK TITTNVTLDV RFQTQDSDKA AAFIEANKQR
EMKKISKDEL GFAVYSINLT K
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