Gene Sbal_2555 details

Gene Information

• Locus tag: Sbal_2555
• ID: 4843013
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: -
• Start bp: 2991356
• End bp: 2991973
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640119779
• Product: lysine exporter protein LysE/YggA
• Protein accession: YP_001050917
• Protein GI: 126174768
• COG category: [R] General function prediction only
• COG ID: [COG1279] Lysine efflux permease
• TIGRFAM ID: [TIGR00948] L-lysine exporter

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.000168732
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGCGG CATTTATACA AGGTATGGGA ATTGGTGGCA GTTTGATTAT TGCTGTGGGC 
GCGCAAAATG CCTTTGTGCT CAAGCAAGGC ATTAAGCGCT CGTACACGTT ACCGATTGCC 
TTGCTCTGCT CTATGATTGA TGCGCTGATG ATCACTGCGG GTGTGGCGGG GCTGGGGCAC 
ATTATTGAAT CTTTCCCGAC CATTAAGCAT GTGGCGAGTT TCGGTGGCGC GGCGTTTCTG 
CTTTGGTACG GTACAAATGC GCTTAAGGCA TCGTTTGTGG CCAAGGGCAT TGAGATGGAG 
CAGGCTGATA GTGCAGATAC CTTCAAAAAG GCCGTGTTGA CCACGCTTGG GATCAGTTTG 
CTTAATCCGC ATTTGTACCT CGACACTGTG GTGTTACTCG GCAGTATCAG CACTCAATTT 
GATGATTTAC ATCGACCTTG GTTTGGCGCC GGTGCCGTGT TGGCATCGTT TATTTGGTTC 
TTCGGCTTAA GTTTTGGTGC GCGTTTGCTG GCGCCCATTT TTACTCGCCC AGCGGCATGG 
CGTTACCTTG ACCGTTTTAT ATGGCTAACC ATGTGGAGTA TTGCCGCCGC GATTATTTGG 
CCCTATGTGG CAGGATAA 

 

Protein sequence

MQAAFIQGMG IGGSLIIAVG AQNAFVLKQG IKRSYTLPIA LLCSMIDALM ITAGVAGLGH 
IIESFPTIKH VASFGGAAFL LWYGTNALKA SFVAKGIEME QADSADTFKK AVLTTLGISL 
LNPHLYLDTV VLLGSISTQF DDLHRPWFGA GAVLASFIWF FGLSFGARLL APIFTRPAAW 
RYLDRFIWLT MWSIAAAIIW PYVAG