| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2478 |
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| Symbol | mnmA |
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| ID | 4841851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 2891645 |
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| End bp | 2892823 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640119701 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001050840 |
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| Protein GI | 126174691 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000132355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCGGC TTAACTTCAA CAACCTAGCC AACACACATA CTCAATGGTT TTTAGGATCT
ATGACATCAA TCGAACCCAC TCACACAGGA AAAAAAGTCA TTGTCGGCAT GTCCGGCGGT
GTAGATTCAT CTGTTTCAGC CTATTTGCTT ATGCAGCAAG GCTATCAGGT TGAAGGCCTT
TTCATGAAGA ACTGGGAAGA AGATGACAAC AACGAGTACT GCGCTGCCGC AGAAGATTTA
AAAGATGCCC AAGCCGTATG TGACAAGCTC GGGATCAAGC TACACACAGT CAACTTTGCT
GCCGAATATT GGGACAATGT CTTTGAGTAT TTCCTCGCTG AATACAAAGC CGGCCGCACG
CCCAATCCCG ATATCATGTG CAACAAAGAA ATCAAATTTA AGGCATTTTT AGAATTTGCC
GACGAAATCC TCGACGCCGA TTACATCGCC ATGGGCCACT ATGTGCGCCG CCGCGATAAT
AGCGATGGCA GCACACAAAT GCTCCGTGGC GTCGATGGCA ATAAAGATCA AAGTTATTTC
CTCTACACCC TTAGCCACGA GCAAGTGGCT CGAAGTCTGT TCCCTGTCGG TGAATTGGAA
AAACATGAAG TACGTGAAAT CGCAAAAGAA ATGGGCCTAA TCACCCATGA TAAAAAAGAT
AGCACTGGCA TCTGCTTTAT CGGTGAGCGC AAGTTCACTG AATTCCTAGG CACTTATTTA
CCGGCGCAGC CTGGCAATAT CGAAACCCCA GAAGGCGAAG TCATAGGTAC ACACCAAGGG
CTGATGTACC ACACCTTAGG CCAGCGTAAA GGCCTAGGCA TTGGCGGCAT GAAAAACAGC
AATGACGATC CTTGGTATGT CGTCGATAAA GATCTTGAGC GTAACGTGTT GATCGTAGGG
CAAGGCGGAC ACCATCCTCG TTTGATGTCG ACCGGCATGA CAGTTAACCA ACTGCATTGG
GTGGATAGAA CCGGACCTGT CGATGGCTGT CATATCGCAG TGAAAACCCG TTATCGCCAA
CAAGATGTGC CTTGTACTTT GACCTACACA GATGAACACA CCTTAGGCGT GGTCTTCGAT
GAGCCTGTTG CGGCGGTGAC GCCAGGACAG TCTGCGGTAT TTTATGATGG TGAAGTCTGC
TTAGGTGGCG GCATCATAGA TCAATTGATC CGAGGGTAA
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| Protein sequence | MSRLNFNNLA NTHTQWFLGS MTSIEPTHTG KKVIVGMSGG VDSSVSAYLL MQQGYQVEGL
FMKNWEEDDN NEYCAAAEDL KDAQAVCDKL GIKLHTVNFA AEYWDNVFEY FLAEYKAGRT
PNPDIMCNKE IKFKAFLEFA DEILDADYIA MGHYVRRRDN SDGSTQMLRG VDGNKDQSYF
LYTLSHEQVA RSLFPVGELE KHEVREIAKE MGLITHDKKD STGICFIGER KFTEFLGTYL
PAQPGNIETP EGEVIGTHQG LMYHTLGQRK GLGIGGMKNS NDDPWYVVDK DLERNVLIVG
QGGHHPRLMS TGMTVNQLHW VDRTGPVDGC HIAVKTRYRQ QDVPCTLTYT DEHTLGVVFD
EPVAAVTPGQ SAVFYDGEVC LGGGIIDQLI RG
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